Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2877 ATGGAAGAAACAGCAACCATCATGGCTGCACTCTCCATCCTCACTCCTTCCCAGCTCTCAGATCTCACCCACTCCATTGTTTCAGCCACTCATCACCACCATCTCCGCCTTTCCTCCCTCCTCTCGTCCCCAACCCTCTTTTCCCTCACTCTCGATTACCTGCACACGCTCTCCCTTCCCCAGAAGACCAACCTCATTGCTCGCCACCTCCTCTCATCTCTCCACAACCTCACGCGGCATATCCAATCCGACAACAATAGATCGCCATCGCCGCCCTTATCCACGGTCATCAGACAGCGTGAGCTGGACGCTGTTCTGCTACTTCTCTTATTCTGCGATACCCACCAACACAACCCAGAAGCTCTTGAAGCACCATATTCCAATTGGCGCAGAAATTTAAGTAAGTTTTTCTCTGATACATTGTTGACGTTTTCTTCTACCGCAATCGGAGCATGTACTGGGACGATTTTGATTCCTTACGTTGAGATGGTAAGCCAGTGCTGGAGACTGGTGGGTGCAATTGGTTGCGGCGGCAGTGTTGGGGAAAAGAATGTTGAAGAAGTGGCGGCGTCGAGAGTGGCGGTGGTGGCGCTGCCGGGGGTGGAGGTGAGAACGGGTGGAAGAGAGTGTGTGATATGCAAAGAGGAGATGAGAGTAGGGAGGGACGCGTGCGAACTGCCATGTCAGCACTTGTTTCATTGGAAGTGTATATTACCATGGCTGAAGAAAAGGAACACGTGTCCTTACTGCAGGTTCCGTCTGCCGTCCGATGATGTGTTCGGAGAGATCCAACGGCTGTGGGAGATCTTGGTTAAAACGGGGGGTAAAGGGCAATGCACTCTAGGCCAGTTCAGCCGAAACAACTCTAAGCAGGACTTTGAACGTATGCATGCCCCTCTCCTACCTAAGCACTGTTCTCCTTGTAAACAGATTAGGACATCCCAATTTCTGCGTTCCCTGGCATTTTTGAGTCTGATCTGTAGTAGTGCCGTGGGGGAAGGTGACAGTTTATACCACAGTTCTACTGGGAACTTGATGCGGCGAAAGGGCAAAGAACAAGGAAATGATGGCTGTTAA 1077 0.5116 MEETATIMAALSILTPSQLSDLTHSIVSATHHHHLRLSSLLSSPTLFSLTLDYLHTLSLPQKTNLIARHLLSSLHNLTRHIQSDNNRSPSPPLSTVIRQRELDAVLLLLLFCDTHQHNPEALEAPYSNWRRNLSKFFSDTLLTFSSTAIGACTGTILIPYVEMVSQCWRLVGAIGCGGSVGEKNVEEVAASRVAVVALPGVEVRTGGRECVICKEEMRVGRDACELPCQHLFHWKCILPWLKKRNTCPYCRFRLPSDDVFGEIQRLWEILVKTGGKGQCTLGQFSRNNSKQDFERMHAPLLPKHCSPCKQIRTSQFLRSLAFLSLICSSAVGEGDSLYHSSTGNLMRRKGKEQGNDGC 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2877 358 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 95 255 - -
Glsi02g2877 358 SUPERFAMILY RING/U-box 203 256 - -
Glsi02g2877 358 CDD RING-H2_PA-TM-RING 209 251 - -
Glsi02g2877 358 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 180 257 IPR013083 -
Glsi02g2877 358 ProSiteProfiles Zinc finger RING-type profile. 210 251 IPR001841 -
Glsi02g2877 358 Pfam Ring finger domain 209 251 IPR001841 -
Glsi02g2877 358 SMART ring_2 210 250 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2877 Glsi-ChrGlsi02 77892620 77896746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2877 2 274 C3H Transcription Factor Family AT5G02750 48.936 3.05e-84 255