Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2875 ATGGTTGGATCCTGCTGGAAACCTTCTTTAGATGGTGACGATGAAGACATGAGTGGGCGAGTTGATGGACTACTATGGTATAAGGATTTGGGGAACCATTTTTATGGGGAATTCTCAATGGCCGTAGTTCAGGCCAATAGTTCGTTGGAGGATCGAAGCCAACTCGAATCTGGACCCTTGAGTTCGAACCCTTTGGGTCCTCACGGGACTTTTATAGGTGTATATGATGGTCATGGGGGAACCGATGCCTCCCAGTTCGTCAGTGACAATCTCTTCTTCAATCTCAAGAGGTTTGCAGCTGAGCATCAAGGCATGTCAGAAAATGTTATAAAAAGGGCCTTTTCGGCAACAGAGGGGAATTTCATCTCTCTGGTGAAGAAACAGTGGCTAACTAAGCCAGAGATTGCATCCACAGGAACATGTTGTTTGACAGGGATAATTTGCAATGGCATGCTGTATGTTGCAAATGCAGGAGACTCCCGAGTGGTGTTAGGAAGAGTGAAGGCAACAAGAGAAATAGAAGCTATTCAATTATCTGCAGAACACAATGTTAACATAGAAACAGTGAGAGATGAACTTCGGTCAAAGCACCCCTTTGATTCACAAATCGTGGTTATGAGACACAATGTTTGGCGAGTGAAAGGCCTCATACAGGTTTCAAGATCCATAGGCGATGCATATCTGAAAAGGGCAGAATTTAACAGAGCCCCTCTACCATCGAAGTTTAGATTGCCTGAACCCTTTTTCAAGCCAATTCTTAGTTGTGAGCCATCAATATCAACCCATAAACTCTATCCTGAAGATCAATTTCTCATTTTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAGAGGCTGTCAACATGGTCGGCAATTACCCACGTCATGGAATTGCCAGGAGGCTTGTAAAAGCTGCACTTCGAGAGGCAGCTAAGAAGAGAGAAATGAGATTCTCAGACCTTCAAAAGATTGAACAAGGGGTGAGGAGACACTTCCATGATGATATAACAGCGACAGTTGTATTTCTTAATCCCAAACTGACAGAAAATAACTCTGTTTGGGGCTCTCCTCTTTCAATCAGAGGAGGCGAGCCTGCCAACTTCTAG 1110 0.4414 MVGSCWKPSLDGDDEDMSGRVDGLLWYKDLGNHFYGEFSMAVVQANSSLEDRSQLESGPLSSNPLGPHGTFIGVYDGHGGTDASQFVSDNLFFNLKRFAAEHQGMSENVIKRAFSATEGNFISLVKKQWLTKPEIASTGTCCLTGIICNGMLYVANAGDSRVVLGRVKATREIEAIQLSAEHNVNIETVRDELRSKHPFDSQIVVMRHNVWRVKGLIQVSRSIGDAYLKRAEFNRAPLPSKFRLPEPFFKPILSCEPSISTHKLYPEDQFLIFASDGLWEHLSNQEAVNMVGNYPRHGIARRLVKAALREAAKKREMRFSDLQKIEQGVRRHFHDDITATVVFLNPKLTENNSVWGSPLSIRGGEPANF 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2875 369 PANTHER PROTEIN PHOSPHATASE 25 342 IPR015655 GO:0004722|GO:0006470
Glsi02g2875 369 Gene3D - 29 353 IPR036457 -
Glsi02g2875 369 ProSiteProfiles PPM-type phosphatase domain profile. 34 344 IPR001932 -
Glsi02g2875 369 SUPERFAMILY PP2C-like 46 345 IPR036457 -
Glsi02g2875 369 FunFam Phosphatase 2C family protein 26 354 - -
Glsi02g2875 369 SMART PP2C_4 31 342 IPR001932 -
Glsi02g2875 369 Pfam Protein phosphatase 2C 58 313 IPR001932 -
Glsi02g2875 369 CDD PP2Cc 35 344 IPR001932 -
Glsi02g2875 369 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2875 Glsi-ChrGlsi02 77887367 77888980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2875 1 364 PP2C-type Phosphatase Gene Family AT3G12620 65.489 0.0 507
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2875 02 77887367 77888980 Glsi11g0893 11 5607705 5619386 CCT