Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2871 ATGTTGCTGAAACTAGGGACCCTACTACTAAAGAAAGGCATTGGCTTGGCGCTTTTGACACTGCTCAAGAAGTTGCTCAAGAAACAGGGTTGGTTGGCACTGTTTTGTCGTTCTATGGTCGCATCTGCTCCTACCTTCTGCAAATCCCATCTCGTCTTTCAAGCTTGGAGGACGTCACTCGAGATCGTTTCCCATAAAATCTCCTCTGCGTACTTGGAGGACGTCACTCCCCCAGTAAACACTGCCTTTTGGAATACACTAGTCCCTTGGCTTAGCACTTTTGACACTGCTCAAGAAGCTGCTCTTGCTTATGACAGAGCTGCTTTGTCCATGAAAGGACGCCAAGCAAGAACCAACTTTATATACTCTGACAATGCCACTTTCCACAAACTTCTTACTCCTGTGGATGCTCAAACTCTCTTCCTAGCTTCCCATTTCATCTATAACCCTCAGGGCAAAGAAAGCGCAAGTTGCAGGTGGTGCATGAGGGAAACAGAGTGCATGAAGAAATGA 513 0.4659 MLLKLGTLLLKKGIGLALLTLLKKLLKKQGWLALFCRSMVASAPTFCKSHLVFQAWRTSLEIVSHKISSAYLEDVTPPVNTAFWNTLVPWLSTFDTAQEAALAYDRAALSMKGRQARTNFIYSDNATFHKLLTPVDAQTLFLASHFIYNPQGKESASCRWCMRETECMKK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2871 170 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 90 133 - -
Glsi02g2871 170 Gene3D AP2/ERF domain 77 122 IPR036955 GO:0003700|GO:0006355
Glsi02g2871 170 CDD AP2 90 120 IPR001471 GO:0003700|GO:0006355
Glsi02g2871 170 ProSiteProfiles AP2/ERF domain profile. 55 121 IPR001471 GO:0003700|GO:0006355
Glsi02g2871 170 SUPERFAMILY DNA-binding domain 85 122 IPR016177 GO:0003677
Glsi02g2871 170 SMART rav1_2 75 127 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2871 Glsi-ChrGlsi02 77805636 77806503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2871 90 143 AP2-EREBP Transcription Factor Family AT5G18560 59.259 6.04e-14 66.6