Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2865 ATGGGTTGGATTCCCTGTTCTGGAAATTCAAACACCAAGAAAAAGATAAAGAAGCAGATGAAGAAGATGGAGGTACAACAGAACCTGGTTGATCAGATCAAAGCCGCCCCAGGGAAGTTGAAGAGGAATTCATCCACGAATTCCAAAGATACCTCTAAAAATGGGGACCCCGATCACATTGCAGCACAGACTTTCACATTTCGTGAGTTGGCAACTGCAACTAGAAATTTTAGAGCAGAATGTCTTTTGGGTGAGGGAGGTTTTGGAAGAGTATACAAAGGGCGCTTGGAAAGTATTGATCAGGTTGTCGCAATTAAGCAACTTGACCGAAATGGGCTGCAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCATCCCAACCTTGTCAACCTTATTGGTTATTGTGCTGACGGTGATCAAAGGCTGCTAGTTTATGAGTATATGCCGTTAGGATCCTTGGAAGACCACTTACATGATATTTCTCCTGGTAAGAAACAGCTCGACTGGAATACACGAATGAAAATAGCAGCTGGGGCAGCAAAAGGGTTGGAATATCTACATGACAAAGCTAATCCCCCTGTCATATACCGAGATTTAAAATGCTCAAACATTTTGCTTGATGAAGAGTACCATCCAAAGTTATCTGATTTTGGCTTGGCTAAACTTGGACCAGTGGGGGAAAACACCCATGTATCAACAAGGGTTATGGGCACCTATGGATATTGTGCTCCTGAGTATGCAATGACAGGTCAACTGACTCTAAAATCAGATGTTTATAGCTTTGGCGTAGTTCTTCTGGAAATAATTACTGGAAGGAAGGCGATTGACAATTCAAAGGCTGCAGGAGAGCAGAATCTTGTTGCGTGGGCCAGACCCTTATTTAAAGATCGAAGAAAATTTTCACAAATGGCGGATCCGATGCTCCAAGGTCAGTATCCTCCAAGAGGGTTATACCAGGCCCTTGCTGTAGCAGCAATGTGTGTTCAGGAGCAGGCTAATATGCGTCCAGTTATAGCTGATGTTGTCACAGCTTTGACTTACCTTGCTTCACAAAGATATGACCCCAATTCACACACACTCCAAAGCTCCCGCCTTGTCCCTGCTACTCCTCCTAGAACCAAGAGGGGGCAATGA 1152 0.4384 MGWIPCSGNSNTKKKIKKQMKKMEVQQNLVDQIKAAPGKLKRNSSTNSKDTSKNGDPDHIAAQTFTFRELATATRNFRAECLLGEGGFGRVYKGRLESIDQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDISPGKKQLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLDEEYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKAAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALTYLASQRYDPNSHTLQSSRLVPATPPRTKRGQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2865 383 PANTHER OS07G0668900 PROTEIN 21 363 - -
Glsi02g2865 383 FunFam Serine/threonine-protein kinase PBS1 49 153 - -
Glsi02g2865 383 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Glsi02g2865 383 MobiDBLite consensus disorder prediction 1 21 - -
Glsi02g2865 383 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Glsi02g2865 383 SUPERFAMILY Protein kinase-like (PK-like) 60 351 IPR011009 -
Glsi02g2865 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Glsi02g2865 383 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2865 383 CDD STKc_IRAK 83 352 - -
Glsi02g2865 383 MobiDBLite consensus disorder prediction 363 383 - -
Glsi02g2865 383 FunFam Serine/threonine-protein kinase PBS1 154 369 - -
Glsi02g2865 383 Pfam Protein tyrosine and serine/threonine kinase 81 350 IPR001245 GO:0004672|GO:0006468
Glsi02g2865 383 MobiDBLite consensus disorder prediction 34 59 - -
Glsi02g2865 383 Gene3D Transferase(Phosphotransferase) domain 1 154 371 - -
Glsi02g2865 383 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2865 Glsi-ChrGlsi02 77626090 77629171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2865 50 356 Glycoside Hydrolase AT3G07070 70.513 9.15e-167 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Glsi02g2865 PK_Tyr_Ser-Thr 1.5e-46 CL0016