Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2863 ATGGATGTTAAGGAAGCAGAAAGGGTAGTTGTTGCCAAACCAGTTGCTTCAAGGCCTACTTGGCCCACTTTTAGATCTTTCTCAGAGCTCCTAGCAGGTGCCATCAATACTCCTCCCATTATTGAATCTCCTCAAACTACAGTTTCAGCTATTAGACCAAAGACTGTGAGGTTCAAGCCAGCTGTGAATCGCTCCCCTTCCGAGGCTAACGTATCTGGAGCTGCACTCAGCAATTCTTCTCAGAAAAATGATGAGCCAGACACCAAGCAATGTGTTCTATACAAGCCAAGGGCTAAGCTTGTATCGAAGGCCACTGTTTCTCTCTTGGCAAATATGGGAAATTACAGTACTAATCGGCAGCATGCACGGGAATCCATGGAGGCGGGTCTTCAAAGCTCAAATCTTCATCAGAGGTATATCCCACCTGCTGAAACAAATCAGACAAGTGAATCTTTTAAGATGGTACCAAAGAACGCGGAGGAGGATCAGAAAACCTCACCATCCACAAGTAATGCTGTTGATCGACCTTCTTATGATGGGTATAATTGGAGGAAATATGGGCAGAAGCAAGTTAAAGGAAGCGAGTACCCACGGAGTTATTATAAATGCACATATCCTAACTGTCCAGTGAAGAAGAAGGTTGAAAGATCATATGATGGGCAAATTGCGGAAATTGTATATAAAGGGGAGCACAACCATTCAAAGTCTCAGCCTCCTAAGCGCAACTCAGGAGCAGGAATATTGATGTCTGACGGAATGGGTCAAGATGCTAAGAACCATTTATTGAGTAGTCACCATGCAGAGAGGAATGAAGCTGGAATTGAGAACCAGAATGACACAGTTCATGTCAAAGTTCCAGTGCCTAATGATTCTGCTCGAATGGGTGCAATCAATGCTGCTGGGGGAAGCACTGAAAATTCATGTGGTCAAAGCGGGGAATGTGAAGATGGAAGCAAGGGATTTGAAGTAGAGGAAGATGAACCCAGAAATAAAAGAAGGAAAAATGAGAATCAATTCAACGAGGCAGCAGTATCAGAAGAAGGTTTAGTGGAGCCTCGAGTCGTGGTGCAAAGTTCTACATATTCTGAAATCCTGGGAGACGGCTTTCGCTGGAGGAAATATGGGCAGAAGGTGGTGAAGGGCAATTCACATCCCAGAAGTTATTATAGATGTACTAGTTTCAAGTGCAATGCGAGGAAACATGTGGAAAGATCAATAGATGACCCGAGAGCATTTATCACTACATACGAGGGGAAGCACAACCATGATATGCCACGCAAAACCTCAGTTGTTGTGGCCTCTGAAGACAAGCCATGA 1317 0.4434 MDVKEAERVVVAKPVASRPTWPTFRSFSELLAGAINTPPIIESPQTTVSAIRPKTVRFKPAVNRSPSEANVSGAALSNSSQKNDEPDTKQCVLYKPRAKLVSKATVSLLANMGNYSTNRQHARESMEAGLQSSNLHQRYIPPAETNQTSESFKMVPKNAEEDQKTSPSTSNAVDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTYPNCPVKKKVERSYDGQIAEIVYKGEHNHSKSQPPKRNSGAGILMSDGMGQDAKNHLLSSHHAERNEAGIENQNDTVHVKVPVPNDSARMGAINAAGGSTENSCGQSGECEDGSKGFEVEEDEPRNKRRKNENQFNEAAVSEEGLVEPRVVVQSSTYSEILGDGFRWRKYGQKVVKGNSHPRSYYRCTSFKCNARKHVERSIDDPRAFITTYEGKHNHDMPRKTSVVVASEDKP 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2863 438 MobiDBLite consensus disorder prediction 293 338 - -
Glsi02g2863 438 ProSiteProfiles WRKY domain profile. 360 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 112 427 IPR044810 GO:0003700
Glsi02g2863 438 Gene3D WRKY domain 350 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 Gene3D WRKY domain 163 236 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 ProSiteProfiles WRKY domain profile. 179 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 MobiDBLite consensus disorder prediction 61 89 - -
Glsi02g2863 438 SUPERFAMILY WRKY DNA-binding domain 362 425 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 SMART WRKY_cls 365 424 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 SMART WRKY_cls 177 235 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 MobiDBLite consensus disorder prediction 155 178 - -
Glsi02g2863 438 SUPERFAMILY WRKY DNA-binding domain 176 235 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 FunFam WRKY transcription factor 163 237 - -
Glsi02g2863 438 MobiDBLite consensus disorder prediction 228 257 - -
Glsi02g2863 438 MobiDBLite consensus disorder prediction 65 87 - -
Glsi02g2863 438 Pfam WRKY DNA -binding domain 179 233 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 Pfam WRKY DNA -binding domain 367 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2863 438 MobiDBLite consensus disorder prediction 161 176 - -
Glsi02g2863 438 MobiDBLite consensus disorder prediction 322 338 - -
Glsi02g2863 438 FunFam WRKY transcription factor 353 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2863 Glsi-ChrGlsi02 77621831 77623833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2863 367 434 WRKY Transcription Factor Family AT2G37260 49.315 8.18e-15 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi02g2863 WRKY 1.6e-25 CL0274