Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2861 ATGACAAGGGATGTCCTGATGAGTGTTAATGGTGATGATAAAGAATTGCAAGAATTGAAAATATTTAAAGATGGAGTTACAGTTGAGGAGTACAGATTACTTGAGGATGATGAGTTGAAAGTTAATGGAATAGCTGAAGAAGTTAAGGTTGGACAAGGGGGGACAGTGGAAGCCCCTGCTGTCCAGCATATACCACAGCAACAGCCTCAAGGGTCTATTGCTTGTTGGGAGAGGTTTTTACATCTTAGATCCCTTAAAGTCTTGCTTGTAGAGAATGATGACTCTACTCGCCATGTCGTCACTGCACTGCTTCACAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTACAAGCATGGAAGATGTTGGAGGATTTAACCAATCATATTGATCTCATTTTAACTGAGGTAGCAATGCCTTGCTTTTCAGGCATTGGTCTTCTATGCAAGATTATGAGCCACCAAATGCTGAAAAATATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTATAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTTGACTTTCTAGTAAAACCCATACGGAAGAATGAGCTCAAAAACCTATGGCAGCATGTTTGGAGGAGATGTCATAGTTCTAGTGGAAGCGGAAGTGAAAGTGGCACACAAACCCAGAAGTCCGTAAAATCGAAGAGTACTGAGAAGTCTGATAACAACACTGGCAGCAATGATGAGGACGACAACGGAAGTGTGGGTCTAAATAATGGGGATGAAAGTGACAATGTTAGTGGCACTCAGAGCTCCTGGACCAAACAAGCTGTAGAAGTTGACAGTCCTAAACAAGTGCCTCAGTGTGATCAAATGGCTGAGTATCCTGATAGCAATTGTGCTCAATTTGACCACTCCAATGCCAAAAAAAGTGGTAACAAGATGATTCCTATAGCCACAAGGGATTGTCCAGAAAAGACGGAGCAGCTTGGTGCAAAACATAGTATCCCACTTGATGTAGGCCTCTCTAAATTCAATGAGCAGATTAGTAGAGGACAGCTGGATCTTAATTGTGAGAATCCATCTGGAAATCTTAGGTGCAAAGGTCCTTCAGCGCCTGACGCCATTACCAGCACTTCTGATTCTCAGATGCAAGGTGGAGAAGTTGAAGCCCCAAATAGAAGACCCATTCCCTCAGATATTGAAAATAAAGCTACTAATAATATCGAAGAGTTGCCATCTCTTGACCTCAGTTTAAAGAGATTTAGAGGGGTTAAAGATGCTGGAACTAAAACTAAGGATGAAAGGAATGTTATAAGCCGTTCAGACCTTTTGGCCTTCTCAAGGTACAATGCAAGCTCTAACCGTAAGAAGTCTCCTACTGGATGTGTTGGAATTGGAAGCAATTTTCCACATGATAATAGCTTAGTAGTTACAAAGAAAGATTTATCACGTGAAATTCAATCTCATTCTAGTGGCAACCCTCCTAGCCTGTACTCCAATGGTCCATGCTATAACATTGATATGGGTTCAACAACTAATAATGCTTTTACTAAAACTGCAGTTATAAGTGAGCCAGCAATGAGAGGCACACACAACGACTCTCCAACTCAGGATTTACAACACCATTTTGAACACCATAACAGTATTGCTAACAACATGCAGCACCAGCTGCCACCTGATCATGATAATTCAACATTAAAGACATTGGCCACGGCTGCACCACATTGTGGATTATCAAATGCAGAAGTGCTGGTTGAAGGTACTATTCAAAATTACAGTATCAATAGAAGTGCATCTGGCAGCAACAATGGAAGCAATGGAGAAAGTGGGAACAGCAGTGCAGTTAATGCCAGAGGGAAAAACTTAGAAAGTGACAATGGAATTGCAGGAAATAGTGGAAGTGGCGATGCCAGTGGGAGTGGGAGTGAGAATACTAACAGAGTAGATCAAAACAAGACTTCTCAAAGAGAAGCAGCCTTAACTAAATTTCGCCAGAAGAGAAAAGAGAGGTGCTTCAGGAAAAAGGTTCGATATCAAAGTAGAAAGAACTTAGCTGAACAACGCCCTCGCTTTCGTGGACAATTTGTGCGACAGCCCTCAAACGGAAATGCCAGTGAGGCAACAGGAAGCTGA 2115 0.4165 MTRDVLMSVNGDDKELQELKIFKDGVTVEEYRLLEDDELKVNGIAEEVKVGQGGTVEAPAVQHIPQQQPQGSIACWERFLHLRSLKVLLVENDDSTRHVVTALLHNCSYEVIEAANGLQAWKMLEDLTNHIDLILTEVAMPCFSGIGLLCKIMSHQMLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSTEKSDNNTGSNDEDDNGSVGLNNGDESDNVSGTQSSWTKQAVEVDSPKQVPQCDQMAEYPDSNCAQFDHSNAKKSGNKMIPIATRDCPEKTEQLGAKHSIPLDVGLSKFNEQISRGQLDLNCENPSGNLRCKGPSAPDAITSTSDSQMQGGEVEAPNRRPIPSDIENKATNNIEELPSLDLSLKRFRGVKDAGTKTKDERNVISRSDLLAFSRYNASSNRKKSPTGCVGIGSNFPHDNSLVVTKKDLSREIQSHSSGNPPSLYSNGPCYNIDMGSTTNNAFTKTAVISEPAMRGTHNDSPTQDLQHHFEHHNSIANNMQHQLPPDHDNSTLKTLATAAPHCGLSNAEVLVEGTIQNYSINRSASGSNNGSNGESGNSSAVNARGKNLESDNGIAGNSGSGDASGSGSENTNRVDQNKTSQREAALTKFRQKRKERCFRKKVRYQSRKNLAEQRPRFRGQFVRQPSNGNASEATGS 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2861 704 SMART REC_2 85 200 IPR001789 GO:0000160
Glsi02g2861 704 Pfam CCT motif 650 692 IPR010402 GO:0005515
Glsi02g2861 704 MobiDBLite consensus disorder prediction 590 652 - -
Glsi02g2861 704 PANTHER TWO-COMPONENT RESPONSE REGULATOR 85 359 IPR045279 GO:0009736
Glsi02g2861 704 MobiDBLite consensus disorder prediction 590 704 - -
Glsi02g2861 704 ProSiteProfiles CCT domain profile. 650 692 IPR010402 GO:0005515
Glsi02g2861 704 ProSiteProfiles Response regulatory domain profile. 86 204 IPR001789 GO:0000160
Glsi02g2861 704 MobiDBLite consensus disorder prediction 209 280 - -
Glsi02g2861 704 FunFam Two-component response regulator-like PRR37 85 243 - -
Glsi02g2861 704 Gene3D - 84 243 - -
Glsi02g2861 704 MobiDBLite consensus disorder prediction 209 226 - -
Glsi02g2861 704 SUPERFAMILY CheY-like 83 209 IPR011006 -
Glsi02g2861 704 MobiDBLite consensus disorder prediction 240 274 - -
Glsi02g2861 704 Pfam Response regulator receiver domain 87 198 IPR001789 GO:0000160
Glsi02g2861 704 MobiDBLite consensus disorder prediction 366 380 - -
Glsi02g2861 704 CDD psREC_PRR 87 190 - -
Glsi02g2861 704 MobiDBLite consensus disorder prediction 688 704 - -
Glsi02g2861 704 MobiDBLite consensus disorder prediction 366 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2861 Glsi-ChrGlsi02 77603562 77612295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2861 161 692 Response Regulator Gene Family AT5G02810 45.283 2.20e-98 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Glsi02g2861 Response_reg 1.4e-20 CL0304