Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2856 ATGCCGCCTAAGCAGCAATCGAAAGCCGATGTGGCGAAGAAGCAGAAGGTCGTAGAAGATAAAACCTTCGGTCTTAAAAACAAGAACAAGAGCAAAAATGTCCAGAAATACGTTCAGAACCTCAAGCAATCCGTACAGCCCAAGCCCGATGCTTCCAAAGCCGCTGCCAAGAAAAAGAAGGAGGAAGAGAAGGCCAAGGAAAAGGAGCTTAATGATTTGTTCAAAATCGCTGTTACTCAACCTAAAGTGCCAGTTGGCGTTGATCCCAAGTCCATAGTATGCGAGTTTTTTAAAGCGGGACAGTGTACCAAGGGCTTTAAATGCAAGTTCTCACATGATTTGAATGTTCAGAGGAAAGGGGAAAAGATTGACATTTACAGCGATAAGCGTGACGAGGAAACAATGGAGGATTGGGATCAAGAGACCTTGGAGAAGGTTGTAGAGTCAAAGAAAATGGAATATAATCAGAACAAACCAACTGACATAGTCTGTAAATACTTTTTGGAAGCAGTAGAGAAGAAGCAATATGGTTGGTTTTGGGCCTGCCCCAATGGTGGTAAGAACTGCCATTATAGGCATGCCCTTCCCCCTGGATATGTTTTAAAATCTCAAATGAAGGCTCTGTTAGAGGAAGAAGCTGATAAAATGCCAATCGAGGAGGAGATTGAAAATCAGCGCTCCAAAGTGAAAACTTCAACTCCTATGACTCCTGATTTATTCATGCAATGGAAGAAGAAGAAGATTGAAGAAAGAGATGCCAATTTGGCTCAACAACAGGCAGATAGAGCCAAGAATGACCGCATGAGTGGTCGTGAGTTATTTTTGTCAGATGCTAGCTTGTTTGTGGATGATGTTGAGGCATATGACAAGTACCAAAGAGAACCTCAATCTGATGATACTGAACAGAAGGCGAATGGAAATGCTGATGAAGATGGTCCAAGCACCTCAACAACAGCTAATGCTGGTGCTGATGCGGATGCTGAAGCTCTTGATGATGATGATGATCTAGACATGGATGAATTGAATGAATTGGAAGCAAGTTTATCGAAGACATCAATCCAAATAAATGAACCAGGAGTTTAA 1083 0.422 MPPKQQSKADVAKKQKVVEDKTFGLKNKNKSKNVQKYVQNLKQSVQPKPDASKAAAKKKKEEEKAKEKELNDLFKIAVTQPKVPVGVDPKSIVCEFFKAGQCTKGFKCKFSHDLNVQRKGEKIDIYSDKRDEETMEDWDQETLEKVVESKKMEYNQNKPTDIVCKYFLEAVEKKQYGWFWACPNGGKNCHYRHALPPGYVLKSQMKALLEEEADKMPIEEEIENQRSKVKTSTPMTPDLFMQWKKKKIEERDANLAQQQADRAKNDRMSGRELFLSDASLFVDDVEAYDKYQREPQSDDTEQKANGNADEDGPSTSTTANAGADADAEALDDDDDLDMDELNELEASLSKTSIQINEPGV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2856 360 Gene3D - 205 279 - -
Glsi02g2856 360 PANTHER ZINC FINGER-CONTAINING PROTEIN P48ZNF 1 359 - -
Glsi02g2856 360 MobiDBLite consensus disorder prediction 290 306 - -
Glsi02g2856 360 MobiDBLite consensus disorder prediction 345 360 - -
Glsi02g2856 360 Coils Coil 246 266 - -
Glsi02g2856 360 Coils Coil 51 73 - -
Glsi02g2856 360 ProSiteProfiles Zinc finger C3H1-type profile. 158 196 IPR000571 GO:0046872
Glsi02g2856 360 Pfam DRG Family Regulatory Proteins, Tma46 216 299 IPR032378 -
Glsi02g2856 360 Gene3D - 87 204 - -
Glsi02g2856 360 SUPERFAMILY CCCH zinc finger 89 113 IPR036855 GO:0046872
Glsi02g2856 360 MobiDBLite consensus disorder prediction 40 64 - -
Glsi02g2856 360 SMART c3hfinal6 158 195 IPR000571 GO:0046872
Glsi02g2856 360 SMART c3hfinal6 88 114 IPR000571 GO:0046872
Glsi02g2856 360 MobiDBLite consensus disorder prediction 307 322 - -
Glsi02g2856 360 ProSiteProfiles Zinc finger C3H1-type profile. 88 115 IPR000571 GO:0046872
Glsi02g2856 360 MobiDBLite consensus disorder prediction 290 360 - -
Glsi02g2856 360 MobiDBLite consensus disorder prediction 326 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2856 Glsi-ChrGlsi02 77576607 77579575 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Glsi02g2856 DFRP_C 1.7e-16 No_clan