Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2846 ATGAGGTCGAGAGGAATCTCAGAGAAGGATAAAGCGGTGAAGAGGGAATCCAATAGAGAGAACCTGCAAAATGTGGATGTGCGCGTAATAATGCTCAAGTTGAAGACAGCTCGCTTTTATCGGACAAACGCTAGAATCTTCTTGCCTGTAACGCTTGCTATAAATTGGTCCATCTCATATCAAAGCCTTGCTCACTGCCCAGTTCGTAGAGCATCGCTTTCACTGTTTTTGGGTGAATCCAGAGTTCCAGAATCCGCAGTTACCATGGGGAAGAGTTACCCGACTGTTAGCGAGGAGTATCAGAAAGCTATTGACAAGTGCAAGAAGAAGCTTAGAGGGCTCATTCAAGAGAAACGCTGTGCTCCCATTATGCTCCGATTGGCATGGCACTCATCTGGTACCTTTGATGTGAAGACGAAGACAGGAGGACCATTTGGTACTATAAGGCACCCAGCAGAACTCTCCCATGGAGCAAACAATGGTCTTGACATCGCAGTCAGGCTTCTGGAACCGATCAAGGAGCAGTTTCCAATTATATCTTACGCTGACTTGTATCAGTTGGCTGGAGTTGTGGCAGTGGAAATTACAGGAGGACCTGAGATACCCTTCCACCCTGGAAGAACGGACAAAACTGACCCACCTCCAGAAGGTCGATTACCAGATGCCACTAAAGGCTCCGACCATTTAAGGGATGTTTTTGGCCATATGGGTCTGTCTGATAAAGATATAGTTGCCTTATCTGGTGGTCACACACTGGGAAGATGCCACAAAGAGCGCTCTGGATTTGAGGGTCCTTGGACACAAAATCCTCTGATTTTCGATAACTCTTATTTCAAGGAACTTCTCAGCGGAGAGAAAGAAGGCTTGATCCAGCTGCCATCAGACAAGGCTCTTTTAAGTGATCCTGTCTTTCGTCCACTTGTTGAAAAATATGCTGCTGATGAGGATGCCTTCTTTGCGGACTATGCTGAAGCTCACTTGAAGCTTTCAGAACTTGGATTTGCGGATGCAGAGTAA 1017 0.4641 MRSRGISEKDKAVKRESNRENLQNVDVRVIMLKLKTARFYRTNARIFLPVTLAINWSISYQSLAHCPVRRASLSLFLGESRVPESAVTMGKSYPTVSEEYQKAIDKCKKKLRGLIQEKRCAPIMLRLAWHSSGTFDVKTKTGGPFGTIRHPAELSHGANNGLDIAVRLLEPIKEQFPIISYADLYQLAGVVAVEITGGPEIPFHPGRTDKTDPPPEGRLPDATKGSDHLRDVFGHMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTQNPLIFDNSYFKELLSGEKEGLIQLPSDKALLSDPVFRPLVEKYAADEDAFFADYAEAHLKLSELGFADAE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2846 338 Coils Coil 97 117 - -
Glsi02g2846 338 SUPERFAMILY Heme-dependent peroxidases 93 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 ProSiteProfiles Plant heme peroxidase family profile. 162 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 ProSitePatterns Peroxidases active site signature. 121 132 IPR019794 GO:0004601
Glsi02g2846 338 Gene3D - 107 333 - -
Glsi02g2846 338 Pfam Peroxidase 109 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 Gene3D Peroxidase, domain 2 220 326 - -
Glsi02g2846 338 MobiDBLite consensus disorder prediction 201 224 - -
Glsi02g2846 338 ProSitePatterns Peroxidases proximal heme-ligand signature. 242 252 IPR019793 -
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 197 209 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 121 136 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 100 120 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 310 334 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 236 257 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 178 196 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 139 149 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 258 282 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 153 177 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Plant ascorbate peroxidase signature 218 235 IPR002207 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 MobiDBLite consensus disorder prediction 205 224 - -
Glsi02g2846 338 PRINTS Haem peroxidase superfamily signature 197 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Haem peroxidase superfamily signature 121 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Haem peroxidase superfamily signature 179 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi02g2846 338 FunFam Cytosolic ascorbate peroxidase 107 226 - -
Glsi02g2846 338 CDD ascorbate_peroxidase 93 334 - -
Glsi02g2846 338 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 65 333 IPR044831 GO:0004601|GO:0034599
Glsi02g2846 338 FunFam L-ascorbate peroxidase, cytosolic 220 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2846 Glsi-ChrGlsi02 77524556 77537983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2846 114 329 Peroxidase AT4G16270 31.298 2.68e-19 85.9