Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2834 ATGAGCATGAGGATCAAATTGAGGAATGCCAAGAAGATGGGGAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTCTCAGCCCTGAGTCAAAGAGGGAGGAACACCAGAAATCAAATAAATCAAAGAAGAAATGGTTTGGGAAGCAAAAATTGCAGACTTCAGACTCATACATGGGTTCTGATCAAGCACTACCTCCTCCTCCTCCACCAAAAGACATCAAATTATCTGATGTTGAGAATGAAAACAGTCAGGTTCATGTTGTTGAAGTTGCAACTTCTGTGGATTTTGAGGGACCTGTTCCTGCTCTTCAGACAGCAGCTGTTGCAGTTCAAGCCTCTACTGTTGCTCAGTTTTCTGGTAAACCAACTGAGGAAGTGGCTGCAATCAGGATTCAAACAGTTTTTCGGGGATACCTGGCAAGAAGAGCATCGCGGGTTTTGAGAGGGCTGGTAAGGTTGAAATCTCTGATAGAAGGACCAGTTGTAAAACGCCAAGCCACTAGTACCCTCCGCACTATGCAAACTTTGGCTCGTGTGCAGTCTCAGATTCGTTCTAGGAGGATCAGAATGTTAGAGGAGAATCAGGCTCTGCAGAGGCAGCTCTTACAGAAGCATGCAAAAGATCTTGAGAGCATGCAGATTGGGGAGGAATGGGATGACAGCCTACAATCGAAGGAACAAATTGAAACCAAGTTACTACACAAGTATGAGGCTGCTATGAGAAGAGAAAAAGCACTGGCTTATGCATTCTCTCATCAGCAAACCTGGAAGAATTCATCTAGATCTATAAACCCAATGTTCATGGATCCAACCAATCCTACGTGGGGCTGGAGCTGGCTGGAACGATGGATGGCAGCCCGAACCTGGGAGAGCCGTAGCATGATGGAGAAAGAAATGAATGATGACCGATCATCAGTAAAAAGTTCAAGCCGCAGCATTACTGGTGGAGAAATCAGCAAATCATATGCTCGTTACCAACTTAATTCTGAAAAGCATTCTCCAGCAGCTAGCCAAAATCCAGGCTCGCCTAGCTTTCAGTCATATTCAACTCCTTCCAAGCCAGCTTCTGCAGCAGTTGCTAGGAAACTGAAGAAAGCGAGTCCCAAGGACAGCTATGGTATGGATGATGATCTTAAAAGTGTTGCTAGTGTGCAGTCAGGCCGGTTTAGGAGGCACACCATTGGCGGCTCATCAGTGAGAGATGACGAGAGCCTTGCAAGCTCTCCAGCTGTTCCAAGTTACATGGTGGCAACTCAGTCTGCAAAAGCCAAGTCTAGAACGCAGAGTCCATTAGCAGCAGAGAATGGGACACCAGACAAAGGATCATTTGGGACAGCTAAGAAAAGGCTTTCTTTCCCACCTTCACCAGGCAGGCCATTGCGGCATTCAGGGCCACCAAAGGTAGAAAGCAACTTAAATGCAGAAATCACTGTGGGCAATGGTGGGGCTGGTTAA 1458 0.4643 MSMRIKLRNAKKMGRKGNWFSTVKKALSPESKREEHQKSNKSKKKWFGKQKLQTSDSYMGSDQALPPPPPPKDIKLSDVENENSQVHVVEVATSVDFEGPVPALQTAAVAVQASTVAQFSGKPTEEVAAIRIQTVFRGYLARRASRVLRGLVRLKSLIEGPVVKRQATSTLRTMQTLARVQSQIRSRRIRMLEENQALQRQLLQKHAKDLESMQIGEEWDDSLQSKEQIETKLLHKYEAAMRREKALAYAFSHQQTWKNSSRSINPMFMDPTNPTWGWSWLERWMAARTWESRSMMEKEMNDDRSSVKSSSRSITGGEISKSYARYQLNSEKHSPAASQNPGSPSFQSYSTPSKPASAAVARKLKKASPKDSYGMDDDLKSVASVQSGRFRRHTIGGSSVRDDESLASSPAVPSYMVATQSAKAKSRTQSPLAAENGTPDKGSFGTAKKRLSFPPSPGRPLRHSGPPKVESNLNAEITVGNGGAG 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2834 485 MobiDBLite consensus disorder prediction 412 436 - -
Glsi02g2834 485 Pfam Protein of unknown function (DUF4005) 402 465 IPR025064 -
Glsi02g2834 485 MobiDBLite consensus disorder prediction 27 41 - -
Glsi02g2834 485 MobiDBLite consensus disorder prediction 330 354 - -
Glsi02g2834 485 PANTHER IQ-DOMAIN 5-RELATED 13 456 - -
Glsi02g2834 485 MobiDBLite consensus disorder prediction 296 315 - -
Glsi02g2834 485 MobiDBLite consensus disorder prediction 1 77 - -
Glsi02g2834 485 Pfam IQ calmodulin-binding motif 128 144 IPR000048 GO:0005515
Glsi02g2834 485 SMART iq_5 124 146 IPR000048 GO:0005515
Glsi02g2834 485 ProSiteProfiles IQ motif profile. 125 153 IPR000048 GO:0005515
Glsi02g2834 485 MobiDBLite consensus disorder prediction 393 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2834 Glsi-ChrGlsi02 77455848 77459317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2834 13 484 IQD Protein Family AT5G03040 51.515 2.74e-141 412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2834 02 77455848 77459317 Glsi11g0916 11 5744065 5747957 CCT
Glsi02g2834 02 77455848 77459317 Glsi02g2834 02 77455848 77459317 ECH