Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2824 ATGTTGGTACTTTCCTGCATATTTTCAAGCACCGTCTTTATCCTCTTTACACTGTTTCTCTGCTTTTCCAGCAGTGTCGTCACAATCGCCACCACTGAATTCGACTTTGGGACCTTAACTTTAACCAGTCTGAAGCTTCTCGGAGATGCCCACTTGAACAATGTCAGTGTGTGGCTCACTAGGGACCTCGCCGTGCCCAACTCTGGTGCCGGGAGAGCTCTCTACTCCAAACCCGTGAGATTCCGGCAACCTGGCAGTCACTCTCCGGCTAGTTTTAAGACCTTTTTCTCGTTTTCAGTTACCAATCTGAATCCTTCGTCCATTGGCGGGGGACTCGCTTTTCTAATCTCGCCGGATGATGAGACGCTCGGTGACGCCGGGGGGTTCCTTGGCCTCCTTGACGTGGAGAACTCTGGTTCTGCCTCGGGTTTTCTGGCGGTAGAATTCGACACGCTCATGGACGTAGAGTTCAAGGACATCAACGGAAATCATGTAGGTCTGGACCTGAATAGCATGGTTTCAACGCAAGTTGCTGACTTGGGATCAGTTGGAATCGATCTAAAAAGTGGTGATCTTGTGAACGCGTGGGTCGAATACGACGGCTTAACGAAGGTCTTTAACATCTGGGTTTCGTACTCAAATCTAAAACCAGAAGAGCCGCTTCTGTCATTCGATCTTGATCTAGATCCGTACGTAAATGACTTTATGTATGTGGGTTTTTCTGGCTCTACACAGGGAAGCACGGAGGTTCACACCATAGAGTGGTGGAGCTTTAGCTCTTCCTTTGACTCGAATTCGCCATTTGGAGCAGGATCATCGGCGGCGGCGCCTCCTCCAACTGTTAATACGGGGAACTCAACTGCTAATTCCGTCAAGTCGCCACCTCCTTCATTGGCTCCTTCTAGTTCTGATTCAGCCTCAAATACTCAACAAAAGGACAGTAAATCGTCCTGCCACAATGAGCTCTGTAAGCAAGGTCCGGGAGCTGTTGCAGGGGTTGTGACGGCAGGGGCTTTTGTTCTGGCTTTGTTCGCCGGTGCATTCATTTGGATGTACTCGAAAAAGGTCAAACACGTTAAGAAGCCCGAATCACTTGCCTCTGAAATCATCAAAATGCCAAAAGAGTTCAGCTACAAGGAGCTCAAATCAGCTACCAAGTGCTTTAATGCGAACAGAATAATTGGTCACGGCGCATTCGGAACGGTCTATAAGGGTATATTGCCAGAGAACGGTGATATTGTTGCGGTGAAGAGATGCAGCCATAGCAGTCAGGGGAAAAACGAATTCTTATCTGAACTATCCATAATTGGGACACTTAGACATCGAAATCTAGTTCGTCTTCAAGGTTGGTGCCATGAGAAAGGTGAAATTCTATTAGTATATGACTTAATGCCCAATGGGAGTTTAGATAAAGCGTTATTTGAGGCCAGAACACCTTTGCCATGGCCTCACAGGCGCAAAATTTTGTTAGGTGTTGCCTCTGCTCTGGCATATTTGCATCAAGAGTGCGAAAATCAGGTAATTCACAGAGACATTAAGACTAGTAACATAATGTTGGATGAAGGTTTCAATGCCCGGTTGGGTGATTTTGGTTTAGCGAGGCAAACGGAGCACGACAAGTCCCCGGATGCCACGGTGGCCGCCGGAACAATGGGGTACCTGGCGCCGGAGTATCTCCTTACAGGTAGAGCTACAGAGAAAACTGACGTGTTCAGTTATGGTGCGGTAGTTCTTGAGGTGGCCAGTGGGAGAAGACCCATAGAGAAAGATGGGAGTGGGGCTGGTAAAGGCGGGGTAAGCAGCAATCTGGTAGAGTGGGTATGGAGTTTGCACCGAGAGGGAAAGTTGCTGGCGGCTGCCGATCCAAGGCTTCGGGATGAGTTTGAGGAGGTGGAGATGAGGAGAGTACTGTTGGTTGGGTTAGCATGCTCTCAACCTGACCCACTGGCCAGGCCCACAATGAGGGGTGTAGTTCAAATGCTGGTGGGCGAAGCCGAAGTCCCCATTATCCCAAGAACTAAGCCATGCTCGAGTTTTAGCACCTCCCACCTCTTAATGAACTTGCAGGACAGTGTCTCTGACTGCAATGGTATAATCACCATCACTACCTCCTCGTCGGACAACAGCTTTAACGGTGGAGATATAGTCTGA 2151 0.4886 MLVLSCIFSSTVFILFTLFLCFSSSVVTIATTEFDFGTLTLTSLKLLGDAHLNNVSVWLTRDLAVPNSGAGRALYSKPVRFRQPGSHSPASFKTFFSFSVTNLNPSSIGGGLAFLISPDDETLGDAGGFLGLLDVENSGSASGFLAVEFDTLMDVEFKDINGNHVGLDLNSMVSTQVADLGSVGIDLKSGDLVNAWVEYDGLTKVFNIWVSYSNLKPEEPLLSFDLDLDPYVNDFMYVGFSGSTQGSTEVHTIEWWSFSSSFDSNSPFGAGSSAAAPPPTVNTGNSTANSVKSPPPSLAPSSSDSASNTQQKDSKSSCHNELCKQGPGAVAGVVTAGAFVLALFAGAFIWMYSKKVKHVKKPESLASEIIKMPKEFSYKELKSATKCFNANRIIGHGAFGTVYKGILPENGDIVAVKRCSHSSQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNARLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGRATEKTDVFSYGAVVLEVASGRRPIEKDGSGAGKGGVSSNLVEWVWSLHREGKLLAAADPRLRDEFEEVEMRRVLLVGLACSQPDPLARPTMRGVVQMLVGEAEVPIIPRTKPCSSFSTSHLLMNLQDSVSDCNGIITITTSSSDNSFNGGDIV 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2824 716 FunFam L-type lectin-domain containing receptor kinase VIII.1 464 679 - -
Glsi02g2824 716 CDD lectin_legume_LecRK_Arcelin_ConA 48 256 IPR001220 GO:0030246
Glsi02g2824 716 CDD STKc_IRAK 394 661 - -
Glsi02g2824 716 Gene3D - 30 271 - -
Glsi02g2824 716 SMART serkin_6 388 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2824 716 PANTHER - 54 671 - -
Glsi02g2824 716 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 262 IPR013320 -
Glsi02g2824 716 SUPERFAMILY Protein kinase-like (PK-like) 370 694 IPR011009 -
Glsi02g2824 716 Pfam Protein kinase domain 389 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2824 716 FunFam L-type lectin-domain containing receptor kinase VIII.1 352 463 - -
Glsi02g2824 716 ProSitePatterns Protein kinases ATP-binding region signature. 394 417 IPR017441 GO:0005524
Glsi02g2824 716 Gene3D Phosphorylase Kinase; domain 1 350 463 - -
Glsi02g2824 716 FunFam L-type lectin-domain containing receptor kinase VIII.1 30 270 - -
Glsi02g2824 716 MobiDBLite consensus disorder prediction 269 320 - -
Glsi02g2824 716 ProSiteProfiles Protein kinase domain profile. 388 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2824 716 ProSitePatterns Legume lectins beta-chain signature. 145 151 IPR019825 -
Glsi02g2824 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Glsi02g2824 716 Gene3D Transferase(Phosphotransferase) domain 1 464 667 - -
Glsi02g2824 716 Pfam Legume lectin domain 33 264 IPR001220 GO:0030246
Glsi02g2824 716 MobiDBLite consensus disorder prediction 269 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2824 Glsi-ChrGlsi02 77416724 77418874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2824 15 698 Receptor kinase-like Gene Family AT3G53380 71.159 0.0 951
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi02g2824 Pkinase 5.2e-50 CL0016