Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2819 ATGCAGCTCCAATTGACAATTCTACGAGCGGCAGTAGCACCGGTGGGGTGGGGTCGGTCTTTGAAACCTGGGAATTGCATTGTGAATGTGGCAAGTGGTGCACCAATTTTTAGTGCTGGCAAAATACAATGCAGTGGGGCGTCGTTAACAAACAGGTTGAACTCTGCTTCTACCAGTGATCTGTTAGTTACTATTGGATGCGATTGGATTTTGATTCCAAGTAACAGGATGAGCGTCATCGACATTCTGACCAGAGTTGATTCGATCTGCAAGAAGTACGACAAATACGACGTCGACAAGCACAAGGATTCCAATATCTCCGGCGACGATGCCTTTGCTCGACTCTACGCCGTCGTTAACGCCGACATCGAGGCCGCGCTTGAGAAAGCAGAAACTGCTTCCAAGGAGAAAAATAGGGCATCTGCCGTAGCCATCAATGCCGAGATTCGTCGTACCAAGGCTCGTTTGCAGGAGGAGGTGCCCAAGTTGCAGAGATTGGCTGTAAAGAAGGTAAAGGGGCTTTCATCAGAAGAATTCGCTGCCCGTAATGATTTGGTTCTTGCATTGCCAGAAAGGATCCAAGCCATCCCAGATGGGACCCCTGCTGCACCCAAACAAACAGGAGGTTGGGCATCTTCTGCTTTGCGTACTGAAATTAAGTTTGATTCAGATGGGCGATTTGACGGTGAATACTTCCAACAAACTGAGGAATCAAGTCAATTCAGGCAGGAGTATGAAATGCGTAGAATGAAGCAGGATCAAGGTTTGGATATGATCGCAGAAGGTTTGGATACATTGAAAAACATGGCACATGATATGAATGAGGAATTTGACAGACAAGTTCCGCTTATGGATGAGATTGACACTAAGGTGGATAAAGCATCCTCTGACCTTAAAAATACCAATGTCAGACTTAAAGACACAGTGAACCAGCTTCGATCCAGTCGAAACTTCTGTATTGATATTGTTTTGTTGATTATAATTTTGGGAATTGCTGCCTATTTATACAATGTCCTGAAGAAGTGA 1026 0.4522 MQLQLTILRAAVAPVGWGRSLKPGNCIVNVASGAPIFSAGKIQCSGASLTNRLNSASTSDLLVTIGCDWILIPSNRMSVIDILTRVDSICKKYDKYDVDKHKDSNISGDDAFARLYAVVNADIEAALEKAETASKEKNRASAVAINAEIRRTKARLQEEVPKLQRLAVKKVKGLSSEEFAARNDLVLALPERIQAIPDGTPAAPKQTGGWASSALRTEIKFDSDGRFDGEYFQQTEESSQFRQEYEMRRMKQDQGLDMIAEGLDTLKNMAHDMNEEFDRQVPLMDEIDTKVDKASSDLKNTNVRLKDTVNQLRSSRNFCIDIVLLIIILGIAAYLYNVLKK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2819 341 Gene3D - 246 307 - -
Glsi02g2819 341 FunFam Putative syntaxin-71-like 246 307 - -
Glsi02g2819 341 Coils Coil 120 143 - -
Glsi02g2819 341 PANTHER SYNTAXIN 123 328 IPR045242 -
Glsi02g2819 341 SUPERFAMILY SNARE fusion complex 239 306 - -
Glsi02g2819 341 Pfam SNARE domain 283 332 IPR000727 -
Glsi02g2819 341 Coils Coil 146 166 - -
Glsi02g2819 341 CDD SNARE_Qc 251 306 - -
Glsi02g2819 341 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 246 308 IPR000727 -
Glsi02g2819 341 SMART tSNARE_6 241 308 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2819 Glsi-ChrGlsi02 77380352 77384911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2819 77 340 SNARE and Associated Proteins AT3G09740 79.699 1.62e-157 440