Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2818 ATGCAATCCTTCCTACCTAGTATTATATTACCCGATAATTGTCCCTTTCTGCATGACCAAGCAGCCTATATAGATCCCATGCACAGTGGTTTCAAGCTTACAGCCATTTTGGTCGATAATATCATCGGCAATTGCTTCATACATTCCCTAGGTTCCTCCGTTGGCAATTTCATGGAGAAAGATTCTAATTTTGAAATCCAACTCCCCCCTGGATTTAGATTCCACCCTTCTGACGAGGAGCTCATTGTTCACTATCTCAGAAACAAAGTCACTTCATGTCCCCTCCCTGCTTCATTCATTGCAGAAATAGATCTCTATAAGTACAACCCATGGGAGCTCCCAAGCAAAGCTTTGTTTGGAGAAGATGAATGGTTTTTCTTTACTCCCAGGGACAGAAAGTATCCCAATGGATTGAGGCCTAATAGAGCAGCTGGTGTAGGTTATTGGAAGGCTACAGGGACTGACAAGCCCATTCTGACTTCGTGTGGGATGAAGAGCATTGGAGTGAAGAAAGCCCTTGTGTTCTACAAGGGACGTCCCCCGAAAGGATCTAAAACCGACTGGATCATGCATGAGTACAGGCTGCTCGATTCAATGATCTTGAACTCCAAGCGAAGAGGGTCTATGAGACTGGATGATTGGGTGCTATGCCGGGTTCGACAAAAAAACAGCAGCCCAAGAAACACTTGGGAAGACTCGAATGAACTTAGTTATGAACCGGCAACCTACTTTCAACAGATGAATTATGAGAATCCTAATCCTGAACCTGTCAAAAGCTCAGTGTACAATGATTTTCCAATGTTACCTTACATTCTGGCTTCTAAAAGTACTCTTCCTTCCATTGGAGTAGCCTCAAGCATAAGCTTTCAATATTGTCGTGATAATGGACAAGGATATGCTTCAATCAGGGAAGACCAGTTCTTAGCATCAACTGCTGAGAGCTTGTTTAATTCGCTGAAGAGAAAACCCCTTGTAGAAAACCAGTTGGACCTTCATGCTCCTCCCTTTAAGAAGTTAAGTGAGGAAGATCACGAGAGGGAAATATTAGACATAGCTATAGGCAAAGGCTACAGTTTCAACAACTTTGATCCTCGGACTTCCATTATACAACCTCAAGAGCTTAATAACTTGGCATTTGCAGGATTTATTTGA 1152 0.428 MQSFLPSIILPDNCPFLHDQAAYIDPMHSGFKLTAILVDNIIGNCFIHSLGSSVGNFMEKDSNFEIQLPPGFRFHPSDEELIVHYLRNKVTSCPLPASFIAEIDLYKYNPWELPSKALFGEDEWFFFTPRDRKYPNGLRPNRAAGVGYWKATGTDKPILTSCGMKSIGVKKALVFYKGRPPKGSKTDWIMHEYRLLDSMILNSKRRGSMRLDDWVLCRVRQKNSSPRNTWEDSNELSYEPATYFQQMNYENPNPEPVKSSVYNDFPMLPYILASKSTLPSIGVASSISFQYCRDNGQGYASIREDQFLASTAESLFNSLKRKPLVENQLDLHAPPFKKLSEEDHEREILDIAIGKGYSFNNFDPRTSIIQPQELNNLAFAGFI 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2818 383 Pfam No apical meristem (NAM) protein 69 195 IPR003441 GO:0003677|GO:0006355
Glsi02g2818 383 Gene3D NAC domain 77 226 IPR036093 GO:0003677|GO:0006355
Glsi02g2818 383 FunFam NAC domain-containing protein 72-like 77 227 - -
Glsi02g2818 383 ProSiteProfiles NAC domain profile. 68 222 IPR003441 GO:0003677|GO:0006355
Glsi02g2818 383 PANTHER NAC TRANSCRIPTION FACTOR 56 68 245 - -
Glsi02g2818 383 SUPERFAMILY NAC domain 64 222 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2818 Glsi-ChrGlsi02 77377396 77378758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2818 67 231 NAC Transcription Factor Family AT1G61110 69.364 4.79e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi02g2818 NAM 9.9e-38 No_clan