LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g2811	ATGCGTAGGGCATTGGTAGAGAGGGCCCTCACCGAGAAAGAGAAAGAGATGGAATTATTAGAGAGTTGGATGGCGGGTATAATGGGATGGCGTAAAGCTCCACCGAGGAACACCATTGGCGACGAGTGGGGAGATGCTGCTACAAGAGTAAGGAAAAAGAGTTGCAGATTATATGACTTGGATGTTGTTCCTGACCTTCATATAAACGCCGATATCCGAGATCTAAGGGAAGCTTACAGTTTTTTTGAGAGTTCAGACATGAAGATTCCTTGTTTGTTTTCCACTTGTTTCTCAGCATCCGTCAAAGAACAAACCATACACGACGACCCAGAAGGAAGCAATGATGGAACGTTTCGTGTATTCTCTTTTAGCGAATTGAAATCTGCGACTCGTGGTTTTCATTCCTCGGACAAAATTGGAGAAGGTGGCTTCGGCTCTGTGTACAAGGGGCGGCTTCGGAATGGAACTATTGTGGCCGTGAAAGTGCTTTCGATTGAGCTGGAATCCATGCGAGGAGAGAGGGAATTTGTGGCAGAACTGGCTACACTCTCTCATATCAACCACGACAATCTAGTCAGTCTTCGAGGGTGTTGCGTAGAAGGAGATCATAGATATTTAGTCTACAATTACATGGAAAATAACAGCCTTTACCACACTTTCTTGGGTACAGAGCAAAGTAGGAAGAGATTCACATGGGAATTGAGGAGGGACATATCCATAGGTGTGGCTCGTGGGCTTACCCATCTCCATGAGCAACTCAATCCCCGTATTGTACACAGAGATATCAAAGCCAGCAACATACTTCTTGATAAAAATTTCGCACCAAAAGTTTCAGACTTTGGTTTCGCAAAGTTACTGAGAGACGAAAAGTCCTACGTCAGCACTCGAGTTGCAGGCACATTGGGCTATCTTGCTCCAGAATACGCGAGTTCTGGACAGCTGACTCGAAAATCAGATGTTTATAGCTTCGGAGTATTACTCTTGGAAATAGTGAGCGGACAAGTAGTGGTGAACGCTTATCAGGATATGGATAGATTCCTAGTAGAGAAGGCGTGGACTGCGTATGAAGCTAATGATCTTTTAAAAATGGTGGATCCTGTGCTTAATATGGACTTTCCGGTGGAAGAAGCCATACGATTCCTAATAGTCGGCCTGCGTTGCGTGCAAGAAACTGCCAAGCTTCGGCCACGAATGTCAGAGGCTGTGGAGATGTTGAGAAACACTTTTGATGCGGAAAGCGTTCATATTTCGAAGCCAGGGATTGTTGCTGATCTCAGAGAAATCAAAATAAGGCGGCAAATGCATTTAGCACAGGAATCAAGTTCTAGTGAAGCAACCTGTTCAACTTCCATCTGGAGCTCGGCCAATCTTGCCCGTTAG	1380	0.4522	MRRALVERALTEKEKEMELLESWMAGIMGWRKAPPRNTIGDEWGDAATRVRKKSCRLYDLDVVPDLHINADIRDLREAYSFFESSDMKIPCLFSTCFSASVKEQTIHDDPEGSNDGTFRVFSFSELKSATRGFHSSDKIGEGGFGSVYKGRLRNGTIVAVKVLSIELESMRGEREFVAELATLSHINHDNLVSLRGCCVEGDHRYLVYNYMENNSLYHTFLGTEQSRKRFTWELRRDISIGVARGLTHLHEQLNPRIVHRDIKASNILLDKNFAPKVSDFGFAKLLRDEKSYVSTRVAGTLGYLAPEYASSGQLTRKSDVYSFGVLLLEIVSGQVVVNAYQDMDRFLVEKAWTAYEANDLLKMVDPVLNMDFPVEEAIRFLIVGLRCVQETAKLRPRMSEAVEMLRNTFDAESVHISKPGIVADLREIKIRRQMHLAQESSSSEATCSTSIWSSANLAR	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g2811	459	Pfam	Protein kinase domain	133	402	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi02g2811	459	Gene3D	Phosphorylase Kinase; domain 1	103	210	-	-
	Glsi02g2811	459	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	102	443	-	-
	Glsi02g2811	459	ProSiteProfiles	Protein kinase domain profile.	133	409	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi02g2811	459	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	211	417	-	-
	Glsi02g2811	459	CDD	STKc_IRAK	139	405	-	-
	Glsi02g2811	459	FunFam	Serine/threonine-protein kinase receptor	103	210	-	-
	Glsi02g2811	459	SMART	serkin_6	133	409	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi02g2811	459	ProSitePatterns	Protein kinases ATP-binding region signature.	139	161	IPR017441	GO:0005524
	Glsi02g2811	459	SUPERFAMILY	Protein kinase-like (PK-like)	116	421	IPR011009	-
	Glsi02g2811	459	Gene3D	Transferase(Phosphotransferase) domain 1	211	418	-	-
	Glsi02g2811	459	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	257	269	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g2811	Glsi-ChrGlsi02	77341002	77344844	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g2811	121	446	Receptor kinase-like Gene Family	AT1G53440	45.427	6.15e-89	290

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Glsi02g2811		Pkinase	2.7e-49	CL0016