Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2810 ATGTCAACTGCGGTTGAGATGCTGAGTAACAAGATGATATTGAAGAATTTCAGATTTCACATTTTCGAACTTGATGATCTCATTGAATTACGAAATCCCAAGACGTGTCGGAGAAATGCTCATTTTTCACAGCGCCCGACCAGTCACAACAACAGAAGGACAAAGTCATTATTAGTTTCCCCGGTTTGCTTATGCTCGTATACCACAGCGCATGCTAAGAAAGTCGTGCGTGTGCGACAGGGTCACATTTGTGGGGTTAAGTGTAAGAAGGAGCTGAAGATAGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCAAGATTCACATTTCACAACTGCAGTGAGGGGCACTGTGGGGCATATTGCACCAGAATATCTTTCCACAAGGCAGTCCTCTGAGAAGACTGATGTCTTTGGATTTGGCATTCTCCTTCTTGAGTTGATAACAGACCAGAGGGCTCTAGAATTTGGAAAAGCAGCAAACCAAAAAGGAGCTATGCTTGATTCGGAGAAGAAACTTGAACTGCTTGTAGACAAGGATCTCAAGAACAATTATGACTGGATCGACCTTGAGGAAATGGTTCAAGTGGCTCTCTTGTGTACTCAATATCTTCCAGGCCACAGACCCAAAATGTCTGAAGTAGTGCGAATGCTTGAAGGTGACAGACTGGCAGAAAGATGGGAAGCTTCTCAAAGAACTGACACAACTAAGTGTAAACCCCATGAGTTCTCTTCATCAGATCGATATTCTGATCTCACTGATGACTCTTCAATAAATATGCTTAAACAATCAAGTGGAGCTGACTCAACTTAA 816 0.4277 MSTAVEMLSNKMILKNFRFHIFELDDLIELRNPKTCRRNAHFSQRPTSHNNRRTKSLLVSPVCLCSYTTAHAKKVVRVRQGHICGVKCKKELKIVGDFGLAKLLDHQDSHFTTAVRGTVGHIAPEYLSTRQSSEKTDVFGFGILLLELITDQRALEFGKAANQKGAMLDSEKKLELLVDKDLKNNYDWIDLEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDRLAERWEASQRTDTTKCKPHEFSSSDRYSDLTDDSSINMLKQSSGADST 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2810 271 MobiDBLite consensus disorder prediction 231 271 - -
Glsi02g2810 271 Pfam Protein kinase domain 89 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2810 271 SUPERFAMILY Protein kinase-like (PK-like) 95 239 IPR011009 -
Glsi02g2810 271 Gene3D Transferase(Phosphotransferase) domain 1 49 239 - -
Glsi02g2810 271 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 93 230 - -
Glsi02g2810 271 ProSiteProfiles Protein kinase domain profile. 1 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2810 271 MobiDBLite consensus disorder prediction 231 250 - -
Glsi02g2810 271 MobiDBLite consensus disorder prediction 251 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2810 Glsi-ChrGlsi02 77332268 77338654 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2810 94 259 Receptor kinase-like Gene Family AT5G16000 79.213 3.83e-87 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi02g2810 Pkinase 3.5e-13 CL0016