Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2809 ATGCAAATTCTCCATAGGTTTCTTGGGTTCTCGCAATCTCTAGTCCTTCTCCAGATTCTGCTGGCCCTGTATTCCCCGTGCGCATATGGGTTCGGGACGACGGGACCAATAATTGCTTCATTCGGCAAAGATGAGTTCTTCTGCTCTATCGATGCAAGTGGAAAGCAGAACGTCATCTGCTGGGGGATCAATGGCTCTTTATCAGTTCCACCGTCTTCTTCAGCTTCGTCCTATTTTAGTAATATCCCTGCTATGGCATCTCTCTCGGGCGGTGAAGGGTTTATATGTGGCATTCTTGCAAATACCTCGCAAGCCTACTGCTGGAGCGCCACCAAGCCAGGTACAGATCTCGTGCCTCCTACGTACCAAAACACTGCTTATTCCGATATTGCGGCGGGCAAGAATCATGTCTGTGCTATCAGAGGATCCTATTATGCCGGTCACGATTCAGGAACCGTTGATTGCTGGGAAATAATAAAAACTGCGAACAACAGTTTGTCATCCAAACACAGCGATTTATATTATGATCAGTCTACTAGCAGTCTCGAATTAAACAAGGTTGTCTCTGGGGAGGGATTTAGCTGTGGTGCGGTCAGAGAAGGAGGACTTGTTTGTTGGGGACCTACTTCCATGAATTTAGGGGTTTCAAATGTGTCGGAAAAGTTCGCACTTTTAGCTTCTGGAAGGGATTCTATTTGTGGTATTTCGAACTTTTCCGGCTATTTGAAATGTTGGGGCGATGCAGATTCATTTGCTGATCCACCGGTTCAGGTTCAGTTGGCCTCTTTGTCAGCTGGGGCTCGCCATTTTTGTGGTATTCGAGCCGATAATCATGTGGTAGAGTGTTGGGGGAGTTTCAATCCATCTGTGGTTCCAAAAGGTTCTGGATTTATGGCGATTGCGTCTTCAGATTATGCAACTTGTGGTATCAGGGAAGATGATCTTCTACTTGATTGCTGGTTAGTCAATGCGTCCAAGCCTGATTTTGATCCCCCATTGGAATTATCCAGTCCGGGTCTTTGCAGTGCCAATTCTTGTAGCCAAGGGGAGTTTGCTTTCAATGTGAGTGTTCTGAATGAGCCAGATTTAACAAGCCTGTGCGTTCGGAAAGATTTGAGGATATGCTTACCCTGTGGATCAAATTGTTCTGAAGGTTTTTTTTTGTCTAGTCCATGCACGGAGAACGCTGACAGAGTATGCACAGCTTGTTCTCTTTGCCAGAACAGCTCCTGTTGGGATGTTTGCCGACTTCAATCCTCTTCAGAGATGCATCGGAAGCGTTGGCATCATTTGCGTAGATTATTGCTCATAATTGGGTCTTCTGCACTGGGTTTCTTACTGATATTAATTTGTGGGTGTCTTTTTCCACGTTTATTTGCCAACCGAAAAGCACAGGGGACTAAGAAGCAATCCAAATCTTGCATAGGCAAACCAGAGCCGGAAGGTGACATGAATGTTGGTCTTCGCTCTTCTCCCTCTGCGGCTTCCTGTCCTGGGATGCCTCAGGTTTTCCGACTTTCAGAGCTAAAAGATGCCACTAATGGGTTTAAGGAATTTAATGAGCTTGGTAGGGGAAGTTACGGTTTTGTTTATAAAGCTGTTTTAGCGGATGGGCGGGTAGTTGCAGTCAAGAGGGCAAATGCAGCCACAATAATTCACACCAACAATCGTGACTTTGAAATGGAATTGGAAATCCTCTGCAAAATTCGGCATTGTAACATTGTAAACTTGTTGGGTTACTGTGCAGAGATGGGGGAGAGGCTGCTTGTTTATGAGTATATGCCACATGGGACACTTTATGACCACCTTCACGGTGGCCTTTCTCCCCTAAACTGGAGTCTCAGGCTAAAGATCTCTATGCAGGTTGCGAAGGGCCTCGAGTACCTCCACAAGGAACTAGTGCCACCAATTGTTCATAGGGACCTCAAGAGTTCAAACGTTCTTTTGGATTCAGAGTGGGGAGCAAGAATTGCAGACTTTGGACTTGTTACTTCGAGTGACAAAGATCTTAATGGGGACATGGAAAGCGATGTTTACAACTTCGGGATTGTATTACTAGAGATTCTTGGCGGAAGAAAAGCTTATGACAGAGATTTCACACCTCCGAACATAGTTGAGTGGGCAGTGCCTTTAATCAAACAGGGGAAGGCAGCTGCCATAATTGATCGGTACGTAACTCTTCCAAGAAACGTTGAGCCTTTGCTTAAGCTTGCTGATATAGCAGAACTCACCGTGAGGGAGAATCCCAGAGAGCGTCCACCGGTGTCAGATATAGCATCTTGGTTAGAGCAAATTGTGAAGGATGGATTGATCTTTTAG 2319 0.4567 MQILHRFLGFSQSLVLLQILLALYSPCAYGFGTTGPIIASFGKDEFFCSIDASGKQNVICWGINGSLSVPPSSSASSYFSNIPAMASLSGGEGFICGILANTSQAYCWSATKPGTDLVPPTYQNTAYSDIAAGKNHVCAIRGSYYAGHDSGTVDCWEIIKTANNSLSSKHSDLYYDQSTSSLELNKVVSGEGFSCGAVREGGLVCWGPTSMNLGVSNVSEKFALLASGRDSICGISNFSGYLKCWGDADSFADPPVQVQLASLSAGARHFCGIRADNHVVECWGSFNPSVVPKGSGFMAIASSDYATCGIREDDLLLDCWLVNASKPDFDPPLELSSPGLCSANSCSQGEFAFNVSVLNEPDLTSLCVRKDLRICLPCGSNCSEGFFLSSPCTENADRVCTACSLCQNSSCWDVCRLQSSSEMHRKRWHHLRRLLLIIGSSALGFLLILICGCLFPRLFANRKAQGTKKQSKSCIGKPEPEGDMNVGLRSSPSAASCPGMPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKISMQVAKGLEYLHKELVPPIVHRDLKSSNVLLDSEWGARIADFGLVTSSDKDLNGDMESDVYNFGIVLLEILGGRKAYDRDFTPPNIVEWAVPLIKQGKAAAIIDRYVTLPRNVEPLLKLADIAELTVRENPRERPPVSDIASWLEQIVKDGLIF 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2809 772 Gene3D Transferase(Phosphotransferase) domain 1 594 672 - -
Glsi02g2809 772 Gene3D Transferase(Phosphotransferase) domain 1 673 769 - -
Glsi02g2809 772 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 345 400 IPR001368 GO:0005515
Glsi02g2809 772 SMART serkin_6 516 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2809 772 FunFam serine/threonine-protein kinase-like protein CCR1 485 593 - -
Glsi02g2809 772 Gene3D - 32 172 IPR009091 -
Glsi02g2809 772 SMART TNFR_3 367 400 IPR001368 GO:0005515
Glsi02g2809 772 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Glsi02g2809 772 Gene3D Phosphorylase Kinase; domain 1 490 593 - -
Glsi02g2809 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Glsi02g2809 772 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 13 766 - -
Glsi02g2809 772 FunFam Serine/threonine-protein kinase-like protein CCR1 594 670 - -
Glsi02g2809 772 ProSiteProfiles Protein kinase domain profile. 516 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2809 772 FunFam Serine/threonine-protein kinase-like protein CCR1 671 769 - -
Glsi02g2809 772 SUPERFAMILY RCC1/BLIP-II 54 316 IPR009091 -
Glsi02g2809 772 Gene3D - 176 348 IPR009091 -
Glsi02g2809 772 Pfam Protein kinase domain 516 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2809 772 SUPERFAMILY Protein kinase-like (PK-like) 492 763 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2809 Glsi-ChrGlsi02 77328711 77331029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2809 14 764 Receptor kinase-like Gene Family AT3G59420 31.509 2.53e-111 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Glsi02g2809 Pkinase 6.4e-33 CL0016