Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2808 ATGATGTTCAGTTCACGTGGTACTGACGATCCTATTGAGCTTTTAATGAGGAAGGCCGTTGTGTGTATTGATTCCTGTTCCAATTGTGGATTTAGTGGAGTTATGGGTTGCTTAGTGGATATCTATAAGCAGTTGCTTTATGGTTATTTTTTGGTAGTTTCGTTTAAGCGTATGTCAATAGTTACAAATTGCTTCCATGACAGAATGGCATCCAGTAGGGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCAGAACAAGAAGCACAGCAGATTGTGAATGCGGCCAAAAATGAAAAATTGGCTAGACTGAAGCAGGCCAAAGAAGAGGCCGAAAAGGAGATTGTTGAATACCGAGCTCAGGTGGAGTATGAGTTTCAAAAGAAGTTGGCAGAGAGCAGTGGAGATTCTGGTGCTAATGTGAAGCGGCTTGAGAAAGAGACTGAAGCAAAGATCCATGACCTGAAAACAGAGGCTGCGAGAATATCTCAGGATGTTGTTACCATGCTCCTCAAGCATGTAACTACTGTGAAAAACTAG 537 0.4246 MMFSSRGTDDPIELLMRKAVVCIDSCSNCGFSGVMGCLVDIYKQLLYGYFLVVSFKRMSIVTNCFHDRMASSRGQGGIQQLLAAEQEAQQIVNAAKNEKLARLKQAKEEAEKEIVEYRAQVEYEFQKKLAESSGDSGANVKRLEKETEAKIHDLKTEAARISQDVVTMLLKHVTTVKN 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2808 178 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 69 178 IPR005124 GO:0016471|GO:0046961|GO:1902600
Glsi02g2808 178 NCBIfam V-type ATPase subunit G 72 177 IPR005124 GO:0016471|GO:0046961|GO:1902600
Glsi02g2808 178 Coils Coil 78 127 - -
Glsi02g2808 178 Gene3D - 68 178 - -
Glsi02g2808 178 Coils Coil 144 164 - -
Glsi02g2808 178 FunFam V-type proton ATPase subunit G 71 178 - -
Glsi02g2808 178 Pfam Vacuolar (H+)-ATPase G subunit 75 177 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2808 Glsi-ChrGlsi02 77320137 77325532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2808 69 178 Primary Pumps ATPases(2) AT3G01390 76.364 1.19e-45 144