Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2791 ATGGAATCAATCACCAAGCCTAATGGTCACCTCCAAAATGGCATCGCCGACAGCTTCTGCTTGAGTAATGGTGTAGCTCATGACCCACTCAATTGGGGTGCAGCCGCCGAGTCACTCAAGGGCAGCCACTTGGAGGAGGTGAAGCGCATGCTGGCGGAGTATCGGAAGCCAGTGGTACGGCTTGGCGGCGAGACACTCACCATCTCTCAGGTGGCAGCCATTGCCGCCCACGACGAAGGTGTTAAGGTGGAGCTGTCGGAGTCGGCGAGGGCCGGCGTTAAGGCCAGTAGCGACTGGGTCATGGACAGCATGAACAAAGGTACCGATAGCTACGGTGTCACCACTGGGTTTGGTGCTACCTCACACAGGCGAACAAAACAAGGCGCAGCTTTGCAAAAAGAGCTGATTAGGTTTTTGAACGCTGGAATATTTGGCAACGGCACAGAGTCATGCCACACTCTGCCACACTCGGCCACCAGAGCTGCCATGCTTGTGAGGATAAACACTCTTCTACAAGGTTACTCGGGCATCCGCTTTGAAATCCTAGAAGCCATCACCAAGCTCCTTAACCATAACATCACCCCATGCTTGCCACTTCGTGGTACAATCACAGCTTCCGGTGATCTCGTCCCCCTTTCTTACATTGCCGGTTTGCTCACTGGCAGACCCAACTCCAAAGCTGTTGGACCTTCCGGAGAAGCCCTCACTCCCAAGGAAGCTTTCCAATTGGCGGGTATCGATTCTGAGTTCTTCGAATTGCAGCCCAAGGAAGGCCTTGCCCTTGTGAATGGCACTGCTGTTGGTTCTGGCTTGGCTTCTATGGTTCTTTTTGAGGCAAACATACTAGCTGTGCTATCTGAAGTTCTGTCGGCAATTTTTGCTGAGGTGATGCAAGGGAAGCCTGAATTTACAGACCATTTGACCCATAAGTTGAAGCACCATCCCGGCCAAATTGAGGCCGCTGCTATTATGGAACACATTTTGGATGGAAGCTCCTATGTTAAAGCAGCTAAGAAGTTGCATGAGACGGATCCCCTACAGAAGCCTAAACAAGATCGCTATGCCCTTCGAACTTCACCGCAATGGCTTGGTCCTCTCATTGAAGTAATCAGATATTCAACCAAATCAATTGAGAGAGAGATAAACTCTGTCAATGATAATCCCTTGATTGATGTTTCAAGGAACAAGGCCTTGCATGGTGGTAATTTCCAGGGAACCCCAATTGGAGTCTCTATGGACAACACACGTTTGGCTCTTGCATCCATTGGCAAACTCTTGTTTGCTCAATTCTCCGAGCTTGTCAATGATTTTTACAACAATGGGTTGCCTTCCAACCTCTCTGCCAGTAGAAATCCCAGCTTGGATTATGGTTTCAAAGGGGCTGAAATTGCCATGGCTTCTTATTGCTCTGAACTCCAATATCTTGCCAACCCCGTAACCAGTCACGTCCAAAGTGCTGAGCAGCACAACCAAGATGTGAACTCTCTGGGTTTGATTTCATCTAGAAAAACAAACGAATCTATTGAGATCTTAAAGCTCATGTCTTCCACATTTCTGATTGCACTTTGCCAAGCAATTGACTTGAGGTATCTGGAAGAGAATTTGAAGAACACAATCAAGAACACCGTTAGCCAAGTTGCAAAGAGAACTCTAACCACAGGTGTCAACGGAGAACTCCATCCTTCCAGATTTTGTGAGAAAGATTTGCTGAAAGTGGTTGATAGGGAGTATGTTTTTGCCTACGTTGATGATCCCTGCAGTGCTACATACCCGTTGATGCAGAAACTAAGGCAAGTACTTGTGGATCACGCTCTAGAAAATGCCGAAAGTGAGAAGAATCCTAGCACATCAATCTTTCAGAAGATTGGAACTTTCGAGAATGAGTTGAAGGCTCAGTTGCCAAAGGAGGTAGAAACTGCAAGGGCAGCATGTGAGAACGGCAACCCTGCAATTCCAAACAGGATCAAGGAATGCAGGTCTTACCCTCTGTACAAGTTTGTGAGAGAGCAACTGGGGACTGAGTTGCTAACTGGAGAGAAGGTCAGGTCACCAGGTGAGGAGTGTGACAAAGTGTTCACAGCAATGTGTAAGGGAAAGATTATTGATCCACTTCTGGAATGCCTTGTGGAGTGGAATGGTGCTCCTCTTCCAATCTGCTAG 2160 0.4796 MESITKPNGHLQNGIADSFCLSNGVAHDPLNWGAAAESLKGSHLEEVKRMLAEYRKPVVRLGGETLTISQVAAIAAHDEGVKVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGEALTPKEAFQLAGIDSEFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHETDPLQKPKQDRYALRTSPQWLGPLIEVIRYSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNESIEILKLMSSTFLIALCQAIDLRYLEENLKNTIKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYVDDPCSATYPLMQKLRQVLVDHALENAESEKNPSTSIFQKIGTFENELKAQLPKEVETARAACENGNPAIPNRIKECRSYPLYKFVREQLGTELLTGEKVRSPGEECDKVFTAMCKGKIIDPLLECLVEWNGAPLPIC 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2791 719 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 201 217 IPR022313 GO:0016841
Glsi02g2791 719 PANTHER HISTIDINE AMMONIA-LYASE 26 719 IPR001106 -
Glsi02g2791 719 NCBIfam phenylalanine ammonia-lyase 28 708 IPR005922 GO:0005737|GO:0006559|GO:0016841
Glsi02g2791 719 Pfam Aromatic amino acid lyase 66 540 IPR001106 -
Glsi02g2791 719 FunFam Phenylalanine ammonia-lyase 532 653 - -
Glsi02g2791 719 CDD PAL-HAL 64 529 IPR001106 -
Glsi02g2791 719 Coils Coil 593 613 - -
Glsi02g2791 719 FunFam Phenylalanine ammonia-lyase 20 265 - -
Glsi02g2791 719 Gene3D - 21 265 IPR024083 -
Glsi02g2791 719 FunFam Phenylalanine ammonia-lyase 266 573 - -
Glsi02g2791 719 Gene3D - 532 653 IPR023144 -
Glsi02g2791 719 SUPERFAMILY L-aspartase-like 28 719 IPR008948 GO:0003824
Glsi02g2791 719 Gene3D Fumarase/aspartase (Central domain) 266 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2791 Glsi-ChrGlsi02 77212971 77216407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2791 26 719 Monolignol Biosynthesis Gene Families AT2G37040 85.591 0.0 1257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2791 02 77212971 77216407 Glsi02g2791 02 77212971 77216407 ECH