Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2787 ATGAAGAGAAAGTTTCTGAGAGGCTGCCTTAACAAGTGGAAGAAAATGAGGAGTCAAGTCATACCTTGTACTTCCTTTGAGTACGGCTGTAAAAGCGATTTATGGTCTTCCATGCATGAAAGGAACTCCATTCCAAGCGATGTCCCAAAGGGTCACCTGGTGGTCTACGTAGGTGAGAACTGCAAGAGATTTGTAATCAAGATCACATTACTCAATCATCCGCTCTTCAAGGCATTGCTGGATCAAGCTCAGGAAGAGTACGATTTTATTGCAGATTCAAAACTCTGTATCCCTTGCGACGAGCATCTTTTTCTCAGTGTCCTTCGCTGTGCTAGCTCTCCACAGAGCGAAGGTTTGACTCTCTGTTTTTGA 372 0.4409 MKRKFLRGCLNKWKKMRSQVIPCTSFEYGCKSDLWSSMHERNSIPSDVPKGHLVVYVGENCKRFVIKITLLNHPLFKALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPQSEGLTLCF 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2787 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 107 IPR003676 GO:0009733
Glsi02g2787 123 Pfam Auxin responsive protein 12 110 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2787 Glsi-ChrGlsi02 77181261 77181632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2787 46 116 Calmodulin-binding Proteins AT4G34750 50.667 8.21e-21 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2787 02 77181261 77181632 Glsi02g2787 02 77181261 77181632 ECH