Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2782 ATGCCGAAGGTTTCTGCGATCAGATTATCTATCCGTACTAGAGTCCAATCCTTTGCGATGAAGTGTTTTCCGTTTCACTATGGAGAAAAGAAGGAAGAACCGAAAAGCACGAAGTCAATTTCAGGTCGGTCCAACAGTTCCACAAACGCTGAGGGTGATGTGAGAAGATCCGGGTCTGAATTGAATTCTCAGAATGCATCAGACAATAGCACAGACTCCCTTAGGAGGACTGCAATTCCCAGTTTGTCTCAAAGACCCAGCAACCTGAGAGTGTTCACTGTATCTGAACTGAAATCAACCACAAAAAATTTCAGTCGCTCTGTTATGCTTGGAGAGGGTGGGTTTGGGTGTGTGTACAAGGGATTGATCAAGAGTGTAGAGGACCCATCCAGAAAAATTGAAGTTGCAGTTAAACAACTTGGTAAAAGAGGAATGCAGGGGCATAGGGAATGGGTGACAGAAGTTAATGTGCTGGGCATTGTTGAGCATCCTAACCTTGTGAAACTAGTGGGTTACTGTGCAGATGATGATGAAAGAGGAATCCAGCGCCTTCTGATTTATGAATATATGCCAAACAGAAGTGTGGAACATCATTTATCACCCCGTTCAGAGACTCCTCTCCCATGGAGTAGGAGATTGAAAATAGCTGAAGATGCAGCTCGTGGCTTAACATACCTACATGAAGAAATGGATTTTCAGATCATCTTCAGAGATTTCAAATCTTCAAATATCCTTCTGGATGAGAATTGGAATGCAAAGCTATCAGACTTCGGGTTAGCAAGATTGGGCCCATCTGAAGGGTTAACTCATGTCTCAACTGCGGTTGTAGGAACAATGGGGTATGCAGCTCCTGAATATGTTCAAACTGGACGTCTCACATCAAAGAGTGATGTATGGAGCTATGGTGTATTCCTTTATGAACTCATCACTGGCAGGCGCCCTTTTGATCGAAATCGTCCTAAGAGTGAGCAGAAGCTCTTGGAATGGGTGAGGCCATACCTATCAGATGGGAAGAAATTTCAACTAATATTGGATCCAAGGCTTGAAAGGAAACACATCTTCAAGTCAGCTCAAAGACTAGCTATTATTGCTAACCGATGCTTAGTCAAAAACCCAAAGAATCGCCCTAAGATGAGTGAGGTATTGGATATGGTAAATCAGATTGTAGAGTCTTCATTAAGTGCCAGTCCACAGCTACCCCTGAAGAATTTGGCATCAACGGAAGCATCTCGGGACCCTGAATTAAAGAACAAGAGAAGGATCATGGATCTAAAAGATGGAGAAAGTAATTGGTTTTTTAGAAGGTGGAGACCAAAGCTTCTAAGAGTAAGAGCAAGTTGA 1341 0.4295 MPKVSAIRLSIRTRVQSFAMKCFPFHYGEKKEEPKSTKSISGRSNSSTNAEGDVRRSGSELNSQNASDNSTDSLRRTAIPSLSQRPSNLRVFTVSELKSTTKNFSRSVMLGEGGFGCVYKGLIKSVEDPSRKIEVAVKQLGKRGMQGHREWVTEVNVLGIVEHPNLVKLVGYCADDDERGIQRLLIYEYMPNRSVEHHLSPRSETPLPWSRRLKIAEDAARGLTYLHEEMDFQIIFRDFKSSNILLDENWNAKLSDFGLARLGPSEGLTHVSTAVVGTMGYAAPEYVQTGRLTSKSDVWSYGVFLYELITGRRPFDRNRPKSEQKLLEWVRPYLSDGKKFQLILDPRLERKHIFKSAQRLAIIANRCLVKNPKNRPKMSEVLDMVNQIVESSLSASPQLPLKNLASTEASRDPELKNKRRIMDLKDGESNWFFRRWRPKLLRVRAS 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2782 446 ProSiteProfiles Protein kinase domain profile. 104 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2782 446 FunFam Serine/threonine-protein kinase PCRK2 190 398 - -
Glsi02g2782 446 SUPERFAMILY Protein kinase-like (PK-like) 80 385 IPR011009 -
Glsi02g2782 446 PANTHER OS01G0588500 PROTEIN-RELATED 61 388 - -
Glsi02g2782 446 ProSitePatterns Protein kinases ATP-binding region signature. 110 138 IPR017441 GO:0005524
Glsi02g2782 446 MobiDBLite consensus disorder prediction 29 80 - -
Glsi02g2782 446 CDD STKc_IRAK 110 388 - -
Glsi02g2782 446 MobiDBLite consensus disorder prediction 39 80 - -
Glsi02g2782 446 Pfam Protein kinase domain 106 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2782 446 FunFam Serine/threonine-protein kinase BIK1 70 189 - -
Glsi02g2782 446 Gene3D Phosphorylase Kinase; domain 1 84 189 - -
Glsi02g2782 446 Gene3D Transferase(Phosphotransferase) domain 1 190 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2782 Glsi-ChrGlsi02 77155390 77158224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2782 20 382 Glycoside Hydrolase AT3G07070 43.048 4.33e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi02g2782 Pkinase 7e-48 CL0016