Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2779 ATGATAACGCAGCGGAGGCCCACTGGACCCACTAACCTCACTCCCAGCGACTCCCAAATACACAAACTTACGAAAAGAATCCATCGCCAAAGTCATCTCTCTCTCTCTTCTGGAAACCCTAAAATATCTAACTCCTCCTATCAAAACCCTAAATCTCTTAATATGAGCTCAGAAGTGGTCCTTCGTAGATTCTCCCAATCTGACCCGAAAGTTAACACAGGGCCACCTACCACCACCGAGTCCAACCCCAATGTGCAACTCACCCACCCTCGAAAATCCACTGCATTATCTTCTTCCCGCTCTACTAAAGACCGGCACACCAAGGTCAACGGCCGTGGCCGCCGTGTCCGTATGCCGCCTCTCTGTGCCGCCCGAATATTCCAATTGACCCGAGAACTCGGCCACCGCTCCGACGGCGAGACCATAGAGTGGCTACTACGCCAGGCTGAGCCATCTATCATCGCCGCCACCGGTACCGGGACAGTCCCCGCCGCACCAGTATCCACCAGCAACGCCGCTATCTCCTCTTCAGCACCCTCTGTTCCTTGCCGGGTCCACCCCGTTTCCGCTGGTAGCAGTGGTCAGGGAATGTTCGCAATGGCTTTGCCGCAGCCTCAGCCGAGTTGTCGATTAGACTTGTGTCAGCCAATCGGAATGGAGTATGCCGCAGCTGCGGCGGCGGCGGCGGCGAATGGGTACCGTAATATGCCGTTCACCGCCTTATTGTTGCAGCCGTCAACGGAGGAGGCTGAGGATACGCAGCAAGATGAGACTCTCCGAGAACAATAG 789 0.5564 MITQRRPTGPTNLTPSDSQIHKLTKRIHRQSHLSLSSGNPKISNSSYQNPKSLNMSSEVVLRRFSQSDPKVNTGPPTTTESNPNVQLTHPRKSTALSSSRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTGTVPAAPVSTSNAAISSSAPSVPCRVHPVSAGSSGQGMFAMALPQPQPSCRLDLCQPIGMEYAAAAAAAAANGYRNMPFTALLLQPSTEEAEDTQQDETLREQ 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2779 262 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 69 187 IPR005333 GO:0003700
Glsi02g2779 262 MobiDBLite consensus disorder prediction 67 97 - -
Glsi02g2779 262 MobiDBLite consensus disorder prediction 67 112 - -
Glsi02g2779 262 MobiDBLite consensus disorder prediction 30 51 - -
Glsi02g2779 262 MobiDBLite consensus disorder prediction 29 51 - -
Glsi02g2779 262 Pfam TCP family transcription factor 101 178 IPR017887 -
Glsi02g2779 262 ProSiteProfiles TCP domain profile. 102 156 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2779 Glsi-ChrGlsi02 77146141 77146999 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2779 102 250 TCP Transcription Factor Family AT2G37000 54.362 2.04e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Glsi02g2779 TCP 1.9e-29 No_clan