Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2761 ATGTTTTCGCTTTGCTTTCGCGTCTTTAAAATCCAAGCCCTTAAGGAATCTTCATGCTCTGCTCTATTAGCGAGGCCAAAGCACATAATACTCAAGTTAGAGATGTGGGATTTTAGGGTTATGCCAGTGGGTGGACTTGTGGAGTGCACTGAACCAAACGGGTCTTTAGGCAAAAGATGTACGGTTCGGGGCAGAAGCAACCGGCCACACTTGGAGGAGGCATGGAGAGATTCTGAGGAGATAAAGACGATCGAGCATTGGAGATGGTCCGAAATGCAAGGCCTTGAGCTCGTGTCTGCTGATCCTATTTCTGACCCGTATAAAACCAACACGCCAACGCCAACAGTGGAGGACAGAGACTCCAAGGTTGAGGAAGCTTCTCCTGCTCAAGAGGAAGCGACAATAGGAGAGCCGAGGGATATGGAGAGTTCTGAACCCAAGAAAGATGGCGGGGTTAGTGTTGCTAATGGGGGTAATAGTAGCGGGGAGAAGCCTGAAAGTGTTCGCGCTGTTGGGTTTGGCGAGCTTTTCAGATTCGCTGATGGGCTGGATTACATTCTGATGGCAATTGGAACGGTTGGAGCAATTGTACATGGCTGTGCTTTGCCTCTGTTTCTTCGGTTCTTCGCCGATCTTGTAAATTCTTTTGGGTCGAATGCCAATAATGTGGACAAGATGACCCAGGAAGTCGTGAAGTATGCATTTTACTTCTTGGTCGTGGGTGCTGCTATATGGGCATCATCATGGGCAGAGATATCCTGCTGGATGTGGACTGGAGAGCGACAATCGACGAAAATGAGGATCAAGTACCTTGAAGCTGCCTTGAACCAGGACATTCAGTACTTCGACACCGAGGTTCGAACATCCGACGTTGTTTTTGCCATTAACACTGATGCTGTAATGGTTCAAGACGCCATTAGCGAGAAGCTGGGTAATTTCCTTCACTACATGGCTACATTCGTTTCTGGATTCGTCGTCGGTTTCACGGCTGTTTGGCAATTAGCTCTAGTCACCCTCGCCGTAGTTCCAATGATAGCTGTGATTGGAGCCATTCACACCACCACGTTGGCCAAGCTCTCTGGCAAAAGCCAGGAATCTCTCTCTCAAGCTGGGAACATTGTGGAACAGACGGTGGTGCAAATTCGAGTTGTATTAGCTTACGTTGGGGAGAGCCGGGCATTAGAAGCCTACTCGTCGGCATTGAAAGTAGCCCAGAAGATGGGTTACAGAAGTGGGTTCGCAAAGGGAATGGGATTGGGCGCGACTTACTTTGTCGTTTTCTGCTGTTATGCGCTTCTGTTATGGTACGGAGGTTATCTGGTTAGGCACCACTACACCAATGGAGGACTTGCCATTGCCACCATGTTTGCTGTTATGATAGGTGGATTGGGCTTGGGGCAGTCTGCGCCAAGCATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGGAAAAATTTTCCGCGTAATGGATCACAAGCCGGTAATAGACCGAAATAGTGAATCGGGCTTGGAATTGGAGTCAGTTACTGGACTCGTGGAGCTGAAAAATGTAGACTTTTCCTACCCGTCAAGGCCAGAGGTTACCATCCTCAATGATTTATCCCTAGTTGTGCCTGCTGGCAAGACCATAGCTTTAGTTGGCAGTAGTGGCTCCGGCAAGAGCACCGTCGTCTCCCTCATTGAGAGATTCTATGACCCAACTTCTGGACAAGTTCTGCTTGACGGGCATGACATTAAAACGTTAAAGCTTAGATGGCTGAGGCAGCAGATAGGGCTAGTAAGCCAAGAGCCTGCTTTATTTGCTACTACAATCAGAGAAAATATACTCTTGGGTAGGCCTGACGCAGACCAGGTTGAGATCGAAGAAGCTGCAAGGGTAGCTAATGCCCATTCATTCATCATCAAGCTTCCCGACGGCTATGACACCCAGGTAGGAGAGAGAGGGCTGCAGCTTTCAGGAGGGCAAAAGCAGAGGATAGCAATAGCAAGGGCCATGTTGAAAAACCCAGCAATTCTTCTTTTGGATGAAGCAACAAGTGCATTAGACTCCGAGTCAGAAAAGCTGGTGCAAGAAGCCCTTGACCGGTTCATGATTGGCAGAACAACTCTTGTAATTGCCCATCGCCTCTCCACTATACGCAAAGCTGACCTTGTAGCTGTACTTCAGCAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCATTGCTAAAGGTGAAAACGGAGTCTATGCCAAGCTTATCCGGATGCAGGAGGCAGCACATGAAACTGCTATGAGTAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCTAGAAACTCTGTAAGCTCACCAATAATTGCTCGGAATTCTTCTTATGGCCGTTCACCATATTCACGCAGGCTGTCTGACTTCTCTACTTCTGACTTTAGTCTGTCACTTGATGCACCACATCCAAATTACAGGCTTGAAAAGCTGGCCTTCAAAGAGCAAGCCAGTTCCTTCTGGCGCCTTGCAAAAATGAACTCTCCTGAATGGTTATATGCTTTAATTGGTTCTGTAGGTTCTGTTGTTTGTGGATCCCTAAGTGCATTCTTTGCCTATGTTCTTAGTGCAGTCCTCAGTGTCTATTACAATCCAAACCACAAATTTATGATCCGACAAATAGAGAAGTACTGCTACCTATTGATTGGCCTTTCATCGGCTGCACTTCTCTTCAACACACTACAGCATTTCTTCTGGGATATTGTAGGAGAAAATCTTACGAAACGAGTGAGGGAGAAAATGCTGACTGCCGTGCTAAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTTGCTCTTGATGCTAACAATGTTAGATCAGCCATTGGAGATCGGATTTCAGTAATTGTCCAGAACACTGCACTTATGCTAGTTGCATGTACAGCAGGGTTTGTTTTGCAGTGGCGCCTTGCCCTTGTCCTTGTAGCCGTTTTCCCTGTTGTTGTTGCAGCCACTGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGAGACCTGGAAGCTGCTCATGCCAAGGCCACCCAACTGGCGGGAGAGGCTATAGCCAATGTTAGGACTGTTGCTGCCTTTAATTCAGAAACAAAAATTGTTGGTCTTTTCACCTCCAACCTTGAAACTCCACTAAGGCGCTGCTTTTGGAAGGGACAGATTTCTGGAAGTGGATTTGGGATAGCACAGTTTGCACTTTATGCTTCCTATGCACTGGGTCTGTGGTATGCTTCTTGGCTTGTGAAGCATGGAATCTCTGATTTCTCTAAAACAATAAGAGTTTTTATGGTCCTCATGGTCTCTGCCAATGGTGCTGCCGAAACTTTAACCTTGGCTCCTGACTTCATCAAGGGAGGTCAAGCCATGAAGTCAGTCTTTGATCTCCTTGACCGGAGAACTGAAATTGAGCCAGATGACCCAGATGCTACTCCTGCTCCTGATCGTCTTCGTGGAGAAGTTGAACTTAAGCATGTTGACTTCTCATATCCCACTCGCCCAGATATGCCAGTATTTCGTGACCTCAGTCTTCGTGCCAGAGCTGGTAAAACTCTCGCCCTTGTTGGACCTAGTGGCTGTGGTAAGAGTTCAGTCATTGCACTTGTACAGCGATTCTATGATCCAACATCTGGGCGGGTAATGATCGATGGAAAGGACATTAGAAAGTATAATCTCAAGTCCCTCAGGCGACACATTGCTGTGGTACCTCAAGAGCCCTGCCTGTTTGCTACTACTATTTATGAAAACATTGCTTATGGGCATGACTCGGCAACGGAAGCCGAGATAATTGAAGCAGCAACTCTTGCCAACGCCCACAAGTTCATATCTGCTTTGCCAGATGGATACAAAACATTTGTTGGGGAGAGAGGAGTTCAACTATCTGGAGGACAAAAGCAGAGAATAGCAATTGCTAGGGCTTTAGTGAGGAAGGCAGAGCTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGCTGAATCTGAGAGGTCTGTTCAGGAGGCTTTGGACCGTGCATGCTCGGGTAAAACAACTATTGTTGTTGCACACAGGCTATCAACTATTAGGAGTGCCAATCTCATTGCCGTGATTGATGATGGGAAAGTGGCAGAGCAAGGATCCCACTCACAGTTGTTGAAAAATTACCCTGATGGGATCTATGCACGCATGATTCAATTACAAAGGTTTTCACATAGCCAAGTGGTTGGGATGGCCTCTGGTTCAAGTTCTTCAGCAAGACCAAAAGACGATGAAAGAGAAACCTAG 4302 0.4691 MFSLCFRVFKIQALKESSCSALLARPKHIILKLEMWDFRVMPVGGLVECTEPNGSLGKRCTVRGRSNRPHLEEAWRDSEEIKTIEHWRWSEMQGLELVSADPISDPYKTNTPTPTVEDRDSKVEEASPAQEEATIGEPRDMESSEPKKDGGVSVANGGNSSGEKPESVRAVGFGELFRFADGLDYILMAIGTVGAIVHGCALPLFLRFFADLVNSFGSNANNVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFLHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGAIHTTTLAKLSGKSQESLSQAGNIVEQTVVQIRVVLAYVGESRALEAYSSALKVAQKMGYRSGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAGKIFRVMDHKPVIDRNSESGLELESVTGLVELKNVDFSYPSRPEVTILNDLSLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKTLKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPDGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELIAKGENGVYAKLIRMQEAAHETAMSNARKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSLDAPHPNYRLEKLAFKEQASSFWRLAKMNSPEWLYALIGSVGSVVCGSLSAFFAYVLSAVLSVYYNPNHKFMIRQIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLETPLRRCFWKGQISGSGFGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGQAMKSVFDLLDRRTEIEPDDPDATPAPDRLRGEVELKHVDFSYPTRPDMPVFRDLSLRARAGKTLALVGPSGCGKSSVIALVQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSATEAEIIEAATLANAHKFISALPDGYKTFVGERGVQLSGGQKQRIAIARALVRKAELMLLDEATSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRSANLIAVIDDGKVAEQGSHSQLLKNYPDGIYARMIQLQRFSHSQVVGMASGSSSSARPKDDERET 1433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2761 1433 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 189 477 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi02g2761 1433 CDD ABC_MTABC3_MDL1_MDL2 1167 1406 - -
Glsi02g2761 1433 Gene3D ABC transporter type 1, transmembrane domain 175 765 IPR036640 GO:0005524|GO:0016020
Glsi02g2761 1433 FunFam ABC transporter B family member 1 175 510 - -
Glsi02g2761 1433 CDD ABC_MTABC3_MDL1_MDL2 512 751 - -
Glsi02g2761 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1159 1406 IPR027417 -
Glsi02g2761 1433 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 844 1131 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi02g2761 1433 SMART AAA_5 1194 1386 IPR003593 GO:0016887
Glsi02g2761 1433 SMART AAA_5 539 725 IPR003593 GO:0016887
Glsi02g2761 1433 Gene3D ABC transporter type 1, transmembrane domain 1065 1164 IPR036640 GO:0005524|GO:0016020
Glsi02g2761 1433 Gene3D ABC transporter type 1, transmembrane domain 809 1013 IPR036640 GO:0005524|GO:0016020
Glsi02g2761 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 751 IPR027417 -
Glsi02g2761 1433 SUPERFAMILY ABC transporter transmembrane region 176 496 IPR036640 GO:0005524|GO:0016020
Glsi02g2761 1433 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 512 748 IPR003439 GO:0005524
Glsi02g2761 1433 MobiDBLite consensus disorder prediction 100 166 - -
Glsi02g2761 1433 Gene3D - 502 752 IPR027417 -
Glsi02g2761 1433 ProSitePatterns ABC transporters family signature. 651 665 IPR017871 GO:0005524|GO:0016887
Glsi02g2761 1433 Gene3D - 1165 1412 IPR027417 -
Glsi02g2761 1433 FunFam ABC transporter B family member 1 1157 1407 - -
Glsi02g2761 1433 Pfam ABC transporter transmembrane region 188 461 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi02g2761 1433 Pfam ABC transporter transmembrane region 845 1114 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi02g2761 1433 CDD ABC_6TM_Pgp_ABCB1_D2_like 833 1149 - -
Glsi02g2761 1433 Pfam ABC transporter 530 679 IPR003439 GO:0005524
Glsi02g2761 1433 CDD ABC_6TM_Pgp_ABCB1_D1_like 188 485 - -
Glsi02g2761 1433 FunFam ABC transporter B family member 19 1133 1155 - -
Glsi02g2761 1433 FunFam ABC transporter B family member 1 502 752 - -
Glsi02g2761 1433 PANTHER ABC TRANSPORTER B FAMILY 156 893 IPR039421 -
Glsi02g2761 1433 Pfam ABC transporter 1186 1334 IPR003439 GO:0005524
Glsi02g2761 1433 ProSitePatterns ABC transporters family signature. 1306 1320 IPR017871 GO:0005524|GO:0016887
Glsi02g2761 1433 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1167 1403 IPR003439 GO:0005524
Glsi02g2761 1433 SUPERFAMILY ABC transporter transmembrane region 831 1154 IPR036640 GO:0005524|GO:0016020
Glsi02g2761 1433 FunFam ABC transporter B family member 1 823 1132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2761 Glsi-ChrGlsi02 77032515 77041363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2761 164 1428 Calmodulin-binding Proteins AT2G36910 89.179 0.0 2318