Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2759 ATGGGTAGAGCTCCTTGCTGCGACAAGGCAAATGTAAAGAAAGGGCCATGGGCTCCTGAAGAAGATGCAAAGCTAAAGGAGTACATAGAGAAACATGGGACTGGAGGGAATTGGATTTCTCTCCCACAAAAAGCTGGTTTGAAAAGGTGTGGGAAAAGCTGTAGACTAAGATGGCTCAACTATCTCAGACCTAACATTAAACACGGCGAGTTCTCTGATGATGAAGATAGGATAATCTGCGGCCTCTTTGCTAACATTGGAAGCCGGTGGTCAATAATAGCAGCTCAGTTGCCGGGACGGACTGACAATGACATCAAGAACTACTGGAACACCAAGCTTAAGAAAAAAGTGATGGGCATAAATCATTCAGCTCAATGGAAACCTCACCAAGCCACCCTTTTATCGGTTCTCCAAAATTCAACATCGTCTTCATCCTCGCCCACTTCTTCACCATTATCATTCAGAGACAGCACCAACTCTTACTGCCAACCTCACGGGCCTTTGACAGGCTCTGAGTCCATTTCGTACTCGTCGAGTCTTTTGAGTGGCCATTCATCTGCTTCTGCGAACTCCTTTTTTCAACCCCAAGAAAGCTTTATGGGGCCCATTCAAAATTACCAAGTTAAAGATAGCGTCTTTATGTTTGGGGGTGAAGCTAGTTGCAGCTCTTCTGATGGGAGCTGCAACAACCAGATCAGTCATGTCAAAGAAGCAGAGGTCGGATACGGTACAGATGGAAGTGGCAATGGAACTTTTGTTGAACAGATGGGTGTGCATAATAATTACCTCCACAGTGGGGTGGAAGAAACCCAGAAGATGATGCTCTCTGATGCTGGTTACGTTAGTGGGTGGACAGAGAAACAAAGTGGATTATGGGAAGCGAATCCGTTGGATTATGGTCTAGAAGAAATCAAACAGCTAATAAGCACCAGTAGTTGCAACAACTTTTTGTTTGATGAAAATAAGACAGAGAAAAGGGTGGTGTACTACTATTGA 996 0.4458 MGRAPCCDKANVKKGPWAPEEDAKLKEYIEKHGTGGNWISLPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDDEDRIICGLFANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKVMGINHSAQWKPHQATLLSVLQNSTSSSSSPTSSPLSFRDSTNSYCQPHGPLTGSESISYSSSLLSGHSSASANSFFQPQESFMGPIQNYQVKDSVFMFGGEASCSSSDGSCNNQISHVKEAEVGYGTDGSGNGTFVEQMGVHNNYLHSGVEETQKMMLSDAGYVSGWTEKQSGLWEANPLDYGLEEIKQLISTSSCNNFLFDENKTEKRVVYYY 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2759 331 SMART sant 67 115 IPR001005 -
Glsi02g2759 331 SMART sant 13 64 IPR001005 -
Glsi02g2759 331 FunFam Transcription factor RAX3 7 68 - -
Glsi02g2759 331 PANTHER OS09G0431300 PROTEIN 1 307 - -
Glsi02g2759 331 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Glsi02g2759 331 MobiDBLite consensus disorder prediction 137 156 - -
Glsi02g2759 331 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Glsi02g2759 331 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Glsi02g2759 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Glsi02g2759 331 Gene3D - 7 68 - -
Glsi02g2759 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Glsi02g2759 331 CDD SANT 16 62 IPR001005 -
Glsi02g2759 331 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Glsi02g2759 331 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Glsi02g2759 331 CDD SANT 70 113 IPR001005 -
Glsi02g2759 331 Gene3D - 69 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2759 Glsi-ChrGlsi02 77017589 77019029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2759 1 119 MYB Transcription Factor Family AT5G57620 85.714 1.23e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi02g2759 Myb_DNA-binding 1.9e-13 CL0123