Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2741 ATGGGTGGCAATCATTCCATGCATGCTAGCATTTACGGTGTGGGTGCATGGCAACTCCTTGTAATCATTGGTTCTTTCTTGCCCCCAAAGTTAATGAGCTGTCAATGCGATATTTTTGCTCAAATAAAGAAACGCACAGACCCCTCTGGGGTACATCCAATGCTTATCTAAGTGAGAAGGGGAAACCATCCGTTGCTATTCCTAGAGTGCTCGATTTTTCAACACACGAGGATGCCGTTCCGAAACATCGCCGTTGGTAGGCCCGAGGAGGCCACTCACCCGGACACCTTGAAGGCTGGGTTGGCCGAGTTCATCTCTACCCTCATCTTCGTGTTCGCCGGCGAAGGCTCCGGCATGGCCTTCAACAAACTCACCAACGACGGTTCCAACACCCCCGCCGGCCTTATCGCCGCGGCAATCGCCCATGCATTTGGTCTTTTCGTTGCTGTCTCCGTCAGTGCTAACATTTCCGGTGGCCACGTCAACCCCGCCGTCACCTTCGGTGCCTTCGTCGGCGGTAACATCTCCTTCTTACGCGGAATCGTCTACTGGATCGCTCAGCTTCTTGGTTCCACAGTTGCCTGCTTGCTTCTGTGGTTCGCCACCGGTGGACTGAGCACCCCACCCTTCGGACTCTCTGCTGGAGTTGGAGTATGGAACGCTGTCGTGTTTGAGATCGTGATGACATTTGGGTTGGTATACACAGTGTACGCGACAGCCGTTGATCCGAAGAAGGGCAGTCTGGGGACGATTGCGCCCATCGCGATCGGTTTCATTGTTGGAGCAAACATTTTAGCGGGTGGGGCATTCGATGGGGCATCCATGAACCCGGCAGTCTCTTTTGGGCCAGCGTTGGTGAGCTGGAGCTGGAACCACCACTGGGTCTACTGGGTTGGGCCCCTCATTGGTGGTGGGCTTGCCGGTATCATTTACGAGTTTGTCTTCATCTCCCACACCCACGAACCGCTCCCCACAGCTGACTACTGA 987 0.5471 MGGNHSMHASIYGVGAWQLLVIIGSFLPPKLMSCQCDIFAQIKKRTDPSGVHPMLIXVRRGNHPLLFLECSIFQHTRMPFRNIAVGRPEEATHPDTLKAGLAEFISTLIFVFAGEGSGMAFNKLTNDGSNTPAGLIAAAIAHAFGLFVAVSVSANISGGHVNPAVTFGAFVGGNISFLRGIVYWIAQLLGSTVACLLLWFATGGLSTPPFGLSAGVGVWNAVVFEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPALVSWSWNHHWVYWVGPLIGGGLAGIIYEFVFISHTHEPLPTADY 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2741 328 Gene3D Glycerol uptake facilitator protein. 81 328 IPR023271 -
Glsi02g2741 328 Pfam Major intrinsic protein 91 311 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi02g2741 328 CDD MIP 98 314 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi02g2741 328 PANTHER AQUAPORIN-8 83 323 IPR034294 -
Glsi02g2741 328 PRINTS Major intrinsic protein family signature 98 117 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi02g2741 328 PRINTS Major intrinsic protein family signature 294 314 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi02g2741 328 PRINTS Major intrinsic protein family signature 142 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi02g2741 328 PRINTS Major intrinsic protein family signature 257 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi02g2741 328 PRINTS Major intrinsic protein family signature 179 198 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi02g2741 328 PRINTS Major intrinsic protein family signature 224 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Glsi02g2741 328 SUPERFAMILY Aquaporin-like 89 325 IPR023271 -
Glsi02g2741 328 ProSitePatterns MIP family signature. 160 168 IPR022357 -
Glsi02g2741 328 FunFam Probable aquaporin TIP1-1 81 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2741 Glsi-ChrGlsi02 76844295 76846506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2741 78 328 Major Intrinsic Protein MIP AT2G36830 81.673 1.96e-147 413