Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2710 ATGAAATTCGACAGAGCCTTCTTTTGGGTCTATGGCTTGGTCACTTTTCTCCTTTCTATCATACTTGCTCAATATACCACGCCTCCTTCCTTCACCTCTACTCCTACCATTATTCCTCAATATAGTTTCAATCAGCTCGCTATGTTAAGTAGGACTATTGAGCTAACGAGTATTGCAAGGACACACCATCACCCCAGGAAGCGTTGTGAGAGCACCAAATGGGATTCCAGCCTCATTTCCGACTACAATGTCACTCTTATATTGACGGTTGACTTAAACGGATGTGCCAACTTTAGCAGTGTGCAGAAAGCAGTGGATGCTGTTCCTGAATCTAGCCCCGATCGAACCCTTATCATAATCGATTCTGGCACATACAGGGAGAAAGTAGTGGTGCAGGCCAACAAAACAAACTTAATACTCCAAGGTCAGGGGTATCTTAACACAATCATAGAATGGAATGATACCTCCAATTCCACTGGAGGAACATTTTATAGCTACTCGGTTGCCATCTTGGCTTCTAAGTTCACTGCTTACAACATCAGCTTTAAGAATACAGCTCCAGCACCCTCACCGGGTGAGGTTGGAGCACAGGCAGTGGCACTGACGGTGAGTGGTGATGAAGCAGCATTCTATGGATGTGGGTTTTATGGCGCGCAGGACACGCTGAATGATCAGAGTGGGAGGCATTATTTTAAAGAATGTTTCATCCAAGGCTCCATTGATTTTATATTTGGAAACGCTAGATCGCTTTATGAGGATTGCATCATAAACTCTATAGCCAAGCAAGATTGGGACGGGGTTAGTGGGTGCATCACAGCTCAAGGGCGGGAATCGATGAGTGAGCAAAGTGGGTTTTCGTTTGTGAATTGCAGCATTGAGGGAAGTGGTAAAGTGTGGCTTGGTAGAGCTTGGGGAGCTTGTGCCACCGTCGTCTTTTCAACAACCTACATGTCTGATGTCGTAGTAGCCGAAGGATGGAACGATTGGAGAGACCCCTCTAGAGACCAAAGCGTCTTCTTCGGAGAGTACCATTGTTTTGGAGATGGGGCAAATTACTCATCTAGAGTCTCGTACGCGAAGCAACTCACGGATGATGAAGCAGCTCCCTACATGGATATCTCATACATTAATGGAAGCGATTGGCTTCTTAATAAACCAAAATATGTTATGCACTCCTCATCCTGA 1185 0.454 MKFDRAFFWVYGLVTFLLSIILAQYTTPPSFTSTPTIIPQYSFNQLAMLSRTIELTSIARTHHHPRKRCESTKWDSSLISDYNVTLILTVDLNGCANFSSVQKAVDAVPESSPDRTLIIIDSGTYREKVVVQANKTNLILQGQGYLNTIIEWNDTSNSTGGTFYSYSVAILASKFTAYNISFKNTAPAPSPGEVGAQAVALTVSGDEAAFYGCGFYGAQDTLNDQSGRHYFKECFIQGSIDFIFGNARSLYEDCIINSIAKQDWDGVSGCITAQGRESMSEQSGFSFVNCSIEGSGKVWLGRAWGACATVVFSTTYMSDVVVAEGWNDWRDPSRDQSVFFGEYHCFGDGANYSSRVSYAKQLTDDEAAPYMDISYINGSDWLLNKPKYVMHSSS 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2710 394 Gene3D - 82 390 IPR012334 -
Glsi02g2710 394 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 78 382 - -
Glsi02g2710 394 FunFam Pectinesterase 82 387 - -
Glsi02g2710 394 ProSitePatterns Pectinesterase signature 2. 236 245 IPR033131 -
Glsi02g2710 394 SUPERFAMILY Pectin lyase-like 86 382 IPR011050 -
Glsi02g2710 394 Pfam Pectinesterase 89 378 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2710 Glsi-ChrGlsi02 76550618 76552352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2710 81 382 Carbohydrate Esterase AT1G05310 56.393 3.08e-121 355