Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2705 ATGGCGGAGGAAGAGGCCACGGAGTCCCGAAAGCAAGCCAGGCTGGCCATCTTTGAACTGGCCAACATGATCAGTGTCCCCATGTCCCTCAACGCCATCGTCCGCCTCCGCGTCCCCGACGCCATCTGGCAATCTGGCTCCAACACTCCCCTTTCCGCTTCCGAGATCCTCGCACGCGTCCTCCCCACCGGCGGCGATGCCGACAACCTCCAACGCATCCTTCGCATGCTCACCAGTTACGGCGTCTTTGCCGAGCACATCGGCATCGGCCACGAAAGGAAATACTCCCTCACCGACGTAGGCAAAACTCTCGTCACAGATAACGAAGGTCTATCCTACGCGCCTTACGTGCTCCAGCACCACCAGGAGGCGCTGATGCGAGCGTGGCCGTTGGTGCACGAGGCAGTGGTGGACTCGACGAAGGAGCCGTTCGCGAAGGCAAACGGAGAGGCAGCGTACGATTACTATGTGAAAGATCAGGAGATGAACGGATTGATGGTGCAGGCCATGTCCGGGGTATCTGTACCGTTCATGAAGGCGTTGTTGGAAGGGTACGATGGGTTTGAAGGGGTGAGGAGGTTGGTGGACGTGGGTGGGAGTGGAGGCGATTGCCTCAGGATGATCTTACAGAAACATCCCTGCGTTCGAGAAGGGATTAACTTTGATCTGCCAGAGGTGGTGGCCAAAGCACCCCTTATTCCAGGGATAACCCACGTGGGGGGTGACATGTTCAAATTCATTCCCCAAGGCGATGCCATCTTCATGAAGTGGATTTTAACCACGTGGACGGACGAAGAATGCAAGCAGATAATGGAGAACTGTTACAAGGCACTGCCAATTGGAGGAAAATTGATTGCTTGTGAGCCAGTGGTGCCGGAGGATTCGGACGAAAGCCATAGAACTCGAGCATTGCTGGAGGGTGACATATTTGTGATGACAATCTACAGAGCCAAGGGTAAGCATAGGACGGAGGAACAATTTAGACAGCTTGCCCTTTCAGCTGGTTTCCCTCGTTTCCGTGCCTTCCATCATTTTGACTACTTCTATACTCTCCTTGAATTCCAAAAATGA 1071 0.5425 MAEEEATESRKQARLAIFELANMISVPMSLNAIVRLRVPDAIWQSGSNTPLSASEILARVLPTGGDADNLQRILRMLTSYGVFAEHIGIGHERKYSLTDVGKTLVTDNEGLSYAPYVLQHHQEALMRAWPLVHEAVVDSTKEPFAKANGEAAYDYYVKDQEMNGLMVQAMSGVSVPFMKALLEGYDGFEGVRRLVDVGGSGGDCLRMILQKHPCVREGINFDLPEVVAKAPLIPGITHVGGDMFKFIPQGDAIFMKWILTTWTDEECKQIMENCYKALPIGGKLIACEPVVPEDSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFRQLALSAGFPRFRAFHHFDYFYTLLEFQK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2705 356 PANTHER O-METHYLTRANSFERASE 20 344 IPR016461 GO:0008168
Glsi02g2705 356 Gene3D Vaccinia Virus protein VP39 110 356 IPR029063 -
Glsi02g2705 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Glsi02g2705 356 SUPERFAMILY "Winged helix" DNA-binding domain 9 108 IPR036390 -
Glsi02g2705 356 Gene3D - 1 109 IPR036388 -
Glsi02g2705 356 FunFam Caffeic acid 3-O-methyltransferase 110 356 - -
Glsi02g2705 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 356 IPR016461 GO:0008168
Glsi02g2705 356 Pfam Dimerisation domain 28 78 IPR012967 GO:0046983
Glsi02g2705 356 Pfam O-methyltransferase domain 132 336 IPR001077 GO:0008171
Glsi02g2705 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 352 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2705 Glsi-ChrGlsi02 76522708 76525034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2705 3 356 Monolignol Biosynthesis Gene Families AT3G53140 76.602 0.0 570