Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2702 ATGGGATGCAAGCAGGACACAATGTTGGTGCCTCCATGGCTTGAACCACTTCTAAACACATCGTTTTTCAGCGTCTGCCGCATTCACGGAGACGCTGCTCGGAGCGAGTGTAACATGTTCTGCCTGGACTGCAATGGCGACGCATTTTGCTTTTATTGCCGCTCATCAAGACACAAGGATCATCAAGTGATTCAGATAAGACGATCTTCGTATCACGATGTAGTGAGGGTGGCTGAGATTCAGAAGGTGTTGGATATAAGTGGGGTTCAGACATATGTGATAAACAGTGCGAGAGTTTTGTTTCTGAATGAGAGGCCTCAGCCAAAATCAGGGAAAGGAGTAGCTCACATTTGTGAGATTTGTGGAAGAAGCCTTTTGGACCCATTTCGGTTCTGTTCTTTGGGATGTAAGCTTGTGGGAGTGAAGAGAAATGGGGATTCAAGCTTTGCTTTAGATGTCAATAGTGAGGCATTAGGAATGGAAAGAAGGGAGGGGATGTCAAGGAGAGCAGTCTCGTCCAGATCAGAAGAAGATCAAGAATTGCGTGAAGTCTCCCCACAAGACATGTACCCGGCCACGCCTCCTCCACCTGCTTCAAATGCAAGGAGAAGAAAAGGCATTCCTCATAGGGCTCCATTTGCCTCCTAA 648 0.4722 MGCKQDTMLVPPWLEPLLNTSFFSVCRIHGDAARSECNMFCLDCNGDAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVGVKRNGDSSFALDVNSEALGMERREGMSRRAVSSRSEEDQELREVSPQDMYPATPPPPASNARRRKGIPHRAPFAS 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2702 215 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 213 - -
Glsi02g2702 215 MobiDBLite consensus disorder prediction 161 215 - -
Glsi02g2702 215 MobiDBLite consensus disorder prediction 161 184 - -
Glsi02g2702 215 Pfam PLATZ transcription factor 67 138 IPR006734 -
Glsi02g2702 215 SUPERFAMILY B-box zinc-binding domain 24 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2702 Glsi-ChrGlsi02 76496830 76497954 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Glsi02g2702 PLATZ 1.1e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2702 02 76496830 76497954 Glsi11g1035 11 6509768 6510883 CCT
Glsi02g2702 02 76496830 76497954 Glsi02g2702 02 76496830 76497954 ECH