Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2688 ATGGTGTCGTGCTATATATATATATATGTGAATATTGAAAAGATGGTAAAATATTTATGCCCGAAAAGGTTGAGATATCTTGTTACGATCGAGCTTAATCGGTTTTCACAGCACAGAAGATTCACAGCAGCCATGGTTCTCAAGACAGAGCTTTGTCGATTCAGTGGGGCCAAGATATATCCTGGTAAAGGCATCAGATTTATTCGTGCTGATTCTCAGGTCTTCTTGTTTGCCAACTCAAAATGCAAACGATATTTTCACAATCGATTGAAGCCATCAAAGCTTACCTGGACTGCCATGTATAGGAAGCAACACAAGAAGGACATCGCCCAAGAAGCTGTGAAGAAGAGGCGTCGTGCTACCAAAAAGCCGTACTCCAGGTCTATTGTTGGTGCTACTTTGGAAGTTATCCAGAAGAAAAGAACTGAGAAGCCAGAGGTTCGAGACGCAGCTAGGGAAGCTGCTCTTCGTGAAATTAAGGAGAGGATCAAGAAAACAAAGGACGAGAAGAAGGCAAAGAAGGCAGAAGTTATGGCCAAATCGCAAAAAGCCCAAGGCAAGAGCAGCGTTCCCAAGGGTGCTATGCCCAAAGGTCCTAAACTTGGTGGTGGAGGCGGGAAGCGCTGA 627 0.445 MVSCYIYIYVNIEKMVKYLCPKRLRYLVTIELNRFSQHRRFTAAMVLKTELCRFSGAKIYPGKGIRFIRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKSQKAQGKSSVPKGAMPKGPKLGGGGGKR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2688 208 Gene3D Ribosomal protein L24e 47 108 IPR038630 -
Glsi02g2688 208 MobiDBLite consensus disorder prediction 162 208 - -
Glsi02g2688 208 Pfam Ribosomal protein L24e 48 111 IPR000988 -
Glsi02g2688 208 ProSitePatterns Ribosomal protein L24e signature. 54 71 IPR023442 -
Glsi02g2688 208 Coils Coil 156 183 - -
Glsi02g2688 208 Gene3D - 113 188 - -
Glsi02g2688 208 PANTHER 60S RIBOSOMAL PROTEIN L24 48 197 IPR000988 -
Glsi02g2688 208 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 50 102 - -
Glsi02g2688 208 CDD Ribosomal_L24e_L24 47 100 IPR000988 -
Glsi02g2688 208 SMART 4TRASH 52 90 IPR011017 -
Glsi02g2688 208 FunFam 60S ribosomal protein L24 47 108 - -
Glsi02g2688 208 MobiDBLite consensus disorder prediction 162 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2688 Glsi-ChrGlsi02 76384365 76390729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2688 45 201 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.713 2.79e-85 248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2688 02 76384365 76390729 Glsi11g1058 11 6632074 6635890 CCT
Glsi02g2688 02 76384365 76390729 Glsi02g2688 02 76384365 76390729 ECH