Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2685 ATGGAATCCAATGGACTAGGTGGTAGTGGTGGTGGTGGTGGTGGAATGTTTTCTGGCATCAGTTCTGGATTGCTTGGAGTAGAAAACCCTTTACAGCAACAACAAAGCCTGCCAAACCCTCAAAATCCCCACCACATACATCATCACCAAATGGTTTCCTATGACACTGATCCCCAGCAATCAATCAAAGGGTTCCCCTATTCGGCCAAGACCAAGCAACAAACGGCCCTCAGCGATGAAGACGACGCGGGGTTCGCGGCAGATGACCTCGCTGGGGATCCCAAAAGGAAATTATCACCTTGGCAGAGAATGAAGTGGACGGATACCATGGTTAGGCTCTTAATAATGGCGGTTTATTGCATTGGCGATGAAGCTGGTTCCGAAGGGACTGATCCTACGGGGAAGAAGAAGTCTGCGGGTTTGTTGCAGAAGAAAGGGAAATGGAAATCGGTGTCAAAAGCTATGATGGAAAAGGGTTTTTTTGTGTCTCCTCAGCAATGTGAGGATAAGTTCAATGATTTGAATAAGAGGTACAAGAGAGTGAATGACATTCTCGGCAAAGGAACAGCTTGCCTAGTCGTGGAAAATCAGAACTTGCTGGATACAATGGACTTGTCGCCAAAGATGAAAGAAGAAGTTCGCAAATTGCTCAATTCTAAGCACCTATTCTTCAAGGAAATGTGTGCTTACCATAATAATTGTGGTCATGGGGGTATTAGTGGGGCTCCTGCTTCCCACCAGTCCCCCGAGGTCGGAACAGAGCTATCTCAGGCTCAAGCTCAACAGCAGCAACGATGCTCTCACTCATCAGGGATGGCGAGGCCGGGGGCAGAAGGACTGAAGATTTTGAAAGGGGTAAGCAGGGAAGAGGAGGATGAGGATGATGATGAGGATGAGTCTGAGGATTATTCTGACGAGGACGATGAAGAGTCGGGTAAAAATGGGCATGGACATGAAGATGAGGATGAGAATGATGGAAGGTCATCGCGGAAAAGATCAAGGAAAGCAGTGTTTTCTGTGTCGTCCCAATTAATGCAGCAAGTGACCAGTGAGGTGATGGGTGTGTTACAAGATGGGGGTAGAAGCCCCTGGGAAAAGAAGCAATGGATGAAGAAGAGGCTAATGCAGTTGGAGGAGCAGCAAATAAGCTATCAGATTCAAGCATTTGAGCTTGAAAAGCAGCGCTTGAAATGGGCGAGGTTTAGTAGCAAGAAGGAGAGGGAATTGGAGAGAGCTAAGCTTGAGAACCAACGGAGGCAGCTGGAAAATGAGAGGATGGTTTTGCTCATTCGCCAGAAGGAGCTCGAACTGCTGAATCTTCATCACCACCAACACCAAAATTCTAATTAA 1350 0.4726 MESNGLGGSGGGGGGMFSGISSGLLGVENPLQQQQSLPNPQNPHHIHHHQMVSYDTDPQQSIKGFPYSAKTKQQTALSDEDDAGFAADDLAGDPKRKLSPWQRMKWTDTMVRLLIMAVYCIGDEAGSEGTDPTGKKKSAGLLQKKGKWKSVSKAMMEKGFFVSPQQCEDKFNDLNKRYKRVNDILGKGTACLVVENQNLLDTMDLSPKMKEEVRKLLNSKHLFFKEMCAYHNNCGHGGISGAPASHQSPEVGTELSQAQAQQQQRCSHSSGMARPGAEGLKILKGVSREEEDEDDDEDESEDYSDEDDEESGKNGHGHEDEDENDGRSSRKRSRKAVFSVSSQLMQQVTSEVMGVLQDGGRSPWEKKQWMKKRLMQLEEQQISYQIQAFELEKQRLKWARFSSKKERELERAKLENQRRQLENERMVLLIRQKELELLNLHHHQHQNSN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2685 449 Pfam Myb/SANT-like DNA-binding domain 103 229 IPR044822 -
Glsi02g2685 449 MobiDBLite consensus disorder prediction 53 74 - -
Glsi02g2685 449 MobiDBLite consensus disorder prediction 51 97 - -
Glsi02g2685 449 Coils Coil 402 431 - -
Glsi02g2685 449 MobiDBLite consensus disorder prediction 240 338 - -
Glsi02g2685 449 Gene3D - 106 180 - -
Glsi02g2685 449 MobiDBLite consensus disorder prediction 246 270 - -
Glsi02g2685 449 PANTHER F16F4.11 PROTEIN-RELATED 11 439 - -
Glsi02g2685 449 MobiDBLite consensus disorder prediction 309 332 - -
Glsi02g2685 449 Coils Coil 374 394 - -
Glsi02g2685 449 MobiDBLite consensus disorder prediction 1 24 - -
Glsi02g2685 449 MobiDBLite consensus disorder prediction 289 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2685 Glsi-ChrGlsi02 76369818 76371167 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi02g2685 Myb_DNA-bind_4 3.4e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2685 02 76369818 76371167 Glsi02g2685 02 76369818 76371167 ECH