Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2676 ATGGAAGAAAAGGAGAGCACCGTTTCTGTGTCGACCGGAAACTCAGATTCCGGTTCACCCCCACAACCAGTGACTACCTCCTTACCTCAGGTAATGAACATGAACATGAACGTGGTGAATAGTGAGGGGGCAACAGTAGCAGCAGCAGCCGCCACAACAACAATGACAACACCGGGAAGTGCCGGAGGGAGCTTTGATCTGTTTGGGAAAAAGAAGAGAGGGAGGCCAAGAAAATATGACTCAGATGGGAACTTGAGGTTGCCATACCAGGGTGCATCACAACCGTCACCGGGCTTTTCTTTGACGTCAAGCTCACCTTCTGACTTCTCCTCCAAAAGGGGTCGAGGTAGGCCTCATGGCTCTAGCAACTGGCAGGTCATTGCATCTTTGGGTGGGTTTTTTGCAAACACGGCTGGTGGGGATTTTACACCTCATGTGGTGACTGTTCATACCGGAGAGGATGTTGCTGGAAAGATCCTTTCTTTTGCCCAGAAGGGTCCTAGAGGAATATGCATTCTTTCTGCCAATGGAGCTATCTCTAATGGTCGATTTGAGATTTTATCTTTGTCTGGGTCGTTCACTGTCTGTGACAATGGTGGCATAAGAAGTCGGAATGGTGGGTTGAGTGTCTCATTAGCTGGCCCTGATGGTCGTGTGATAGGAGGAGGTGTTGCTGGTTTATTGACAGCTGCTAGCCCAATCCAAATTGTATTGGGAAGCTTCATGCCAAATGGTTATAAGACACCTAAAAGGAAGTACCACCGTGAACATACAGTGGCCTCCCCAAATTCAGGTGCTCCAGATACTGTGATGGTAGCTAGGCCTATCTCACAAGCAAATCCTGTTGGTGAAAACTGTTTGACCCCTACGTTCCAGTTACCACAACAAAGCCAGAGAGAATCTGACGGCCTCACAAGTGATAAACACAACTTAGATGCTGCAACCGATGAACATTGGATCGGTTCTGAAAATTTGTCAGATCAGAGGCCATACCCAGACATCAATATATCTTTGCCTGCCGAATAG 1026 0.4795 MEEKESTVSVSTGNSDSGSPPQPVTTSLPQVMNMNMNVVNSEGATVAAAAATTTMTTPGSAGGSFDLFGKKKRGRPRKYDSDGNLRLPYQGASQPSPGFSLTSSSPSDFSSKRGRGRPHGSSNWQVIASLGGFFANTAGGDFTPHVVTVHTGEDVAGKILSFAQKGPRGICILSANGAISNGRFEILSLSGSFTVCDNGGIRSRNGGLSVSLAGPDGRVIGGGVAGLLTAASPIQIVLGSFMPNGYKTPKRKYHREHTVASPNSGAPDTVMVARPISQANPVGENCLTPTFQLPQQSQRESDGLTSDKHNLDAATDEHWIGSENLSDQRPYPDINISLPAE 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2676 341 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 41 297 IPR039605 GO:0003680
Glsi02g2676 341 MobiDBLite consensus disorder prediction 318 341 - -
Glsi02g2676 341 Gene3D - 144 260 - -
Glsi02g2676 341 SMART AT_hook_2 70 82 IPR017956 GO:0003677
Glsi02g2676 341 SMART AT_hook_2 112 124 IPR017956 GO:0003677
Glsi02g2676 341 CDD DUF296 143 241 IPR005175 -
Glsi02g2676 341 MobiDBLite consensus disorder prediction 87 121 - -
Glsi02g2676 341 SUPERFAMILY AF0104/ALDC/Ptd012-like 141 247 - -
Glsi02g2676 341 MobiDBLite consensus disorder prediction 7 28 - -
Glsi02g2676 341 ProSiteProfiles PPC domain profile profile. 139 265 IPR005175 -
Glsi02g2676 341 MobiDBLite consensus disorder prediction 1 28 - -
Glsi02g2676 341 MobiDBLite consensus disorder prediction 54 121 - -
Glsi02g2676 341 Pfam Plants and Prokaryotes Conserved (PCC) domain 144 241 IPR005175 -
Glsi02g2676 341 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2676 Glsi-ChrGlsi02 76327225 76329538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2676 70 267 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 48.673 2.31e-55 182