Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2652 ATGGAGAAGCGAAGGGCTGGAAGGAAGAAGTTCCAAGAGACTCGGCATCCCATCTACAAAGGGGTAAGGCAAAAGAATGGGAAGTGGGTGTGCGAGCTGCGACAACCTAATAAGAAAACTCGGGTATGGGTGGGCACCTTTGCTAATCCTGACATGGCAGCTCTAGCATACGATGTTGCTGCTCTTGCTTTCAAGGGCGACTCTGCTTCCTTGAATTTCCCGCACGCAGCTGCCTTCTTGCCACGCCTTGATTCAAATACCTCCTCTATCAGATCCATTCAGTCTGCAGCCACGGAAGCAGCTGAGAAGTTCTTTTCTGGGGACTCTGCTGCTTCTGCTTTGTCAGAAGGAGACTCCAAGAGTTTGATTTGGGATGAAGAGGAGGTGTTTAACATGCCGGGGCTCATGAACAGCATGGCGGAAGCGTTGATTATCACACCCCCAGCCTTGCAGAGAGGCTTCAATTGGGTTGGTGTCGAAACTACCGTGGACTTGACTCTCTGGGGAGACTGA 513 0.5127 MEKRRAGRKKFQETRHPIYKGVRQKNGKWVCELRQPNKKTRVWVGTFANPDMAALAYDVAALAFKGDSASLNFPHAAAFLPRLDSNTSSIRSIQSAATEAAEKFFSGDSAASALSEGDSKSLIWDEEEVFNMPGLMNSMAEALIITPPALQRGFNWVGVETTVDLTLWGD 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2652 170 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Glsi02g2652 170 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 3 168 IPR045277 GO:0003700
Glsi02g2652 170 SMART rav1_2 18 80 IPR001471 GO:0003700|GO:0006355
Glsi02g2652 170 ProSiteProfiles AP2/ERF domain profile. 18 74 IPR001471 GO:0003700|GO:0006355
Glsi02g2652 170 SUPERFAMILY DNA-binding domain 18 75 IPR016177 GO:0003677
Glsi02g2652 170 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Glsi02g2652 170 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Glsi02g2652 170 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Glsi02g2652 170 CDD AP2 17 76 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2652 Glsi-ChrGlsi02 76138992 76139504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2652 3 168 AP2-EREBP Transcription Factor Family AT4G25470 44.809 5.62e-44 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g2652 AP2 8.8e-11 CL0081