Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2648 ATGGGGAGTTATTTCAGCATGGCTCAGTGGCAGGAGCTTGAGTTGCAGGCGTTAATATTCAGGTACATGTTGGCCGGTGCAGCTGTTCCTACGGAGCTTCTCAACCCAATTAAGAAGAGCCTTCTTCATTCCCCTCCTCCATATTTCCTCCATCACCCTCTTCCTCATTATCAGCCTCCCTTGTTGCAATCAGGGTATTGGGGAGGAGCTACCATGGATCCGGAGCCCGGCCGCTGTCGGAGAACCGACGGTAAGAAATGGCGGTGCTCGAGGGACGTGGTGGGCGGACAGAAGTACTGCGAGCGCCACATGCACCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACCAAACACCGCCGGCGGTGCTACAACCTCCATATCTGCGCCGCCTATGGCAACAGCAACACTGAAATCCCCTTTCGCCCTGCTTCACCTTAATCAATGTTCGTCTGGGACCAAGAATGGGAACGGGAGGGTGTTTGAAAACCAAGATAATGTGGGCGGGGAAGGTAGATCAGATGGGCGTATCCTGAGGCATTTTTTCGATGATTGGCCGCGATCACTTCAAGAACCTGACAATGCTGAAAGCAACACTAGCTCAATCAACTCCGCCACATGCCTTTCTATTTCAATGCCCGGAAATTCTCCGTCGGATGTGTCATTGAAATTGTCAACTGGCGATGGAGAGTATCCATGTCCTGGACAGCAATCGCAGTTGAATTGGGCAGCAGGATGGACTTCGGCTAATCCAGTGGCTTCAATGGGAGGACCGCTTGCAGAAGCTCTGAGATCATCTACCTCAACTTCATCACCGACCAGTGTTCTACATCAGTTGCCTCGTAGTTCTGCCTCTGAAACCAGCTTCATTAGCACCTAG 888 0.5214 MGSYFSMAQWQELELQALIFRYMLAGAAVPTELLNPIKKSLLHSPPPYFLHHPLPHYQPPLLQSGYWGGATMDPEPGRCRRTDGKKWRCSRDVVGGQKYCERHMHRGRNRSRKPVELPTPNTAGGATTSISAPPMATATLKSPFALLHLNQCSSGTKNGNGRVFENQDNVGGEGRSDGRILRHFFDDWPRSLQEPDNAESNTSSINSATCLSISMPGNSPSDVSLKLSTGDGEYPCPGQQSQLNWAAGWTSANPVASMGGPLAEALRSSTSTSSPTSVLHQLPRSSASETSFIST 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2648 295 ProSiteProfiles QLQ domain profile. 4 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi02g2648 295 MobiDBLite consensus disorder prediction 107 133 - -
Glsi02g2648 295 Pfam WRC 74 116 IPR014977 -
Glsi02g2648 295 PANTHER GROWTH-REGULATING FACTOR 5 4 219 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi02g2648 295 SMART QLQ_2 3 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi02g2648 295 MobiDBLite consensus disorder prediction 266 295 - -
Glsi02g2648 295 Pfam QLQ 5 37 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi02g2648 295 ProSiteProfiles WRC domain profile. 73 117 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2648 Glsi-ChrGlsi02 76116613 76118115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2648 1 282 GRF Transcription Factor Family AT3G52910 54.248 2.27e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Glsi02g2648 WRC 2.8e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2648 02 76116613 76118115 Glsi11g1087 11 6860952 6863660 CCT
Glsi02g2648 02 76116613 76118115 Glsi02g2648 02 76116613 76118115 ECH