Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2644 ATGCCTATTGGAATAAAGAGTGAGCTTGTTGACCTCGAAACCCATTATAATGTTCTTAATGTGAAGGAAGATGCAAGCTATGAAGAAATTCGTGCTAGTTACTGCAGTGCTATACACAGTTTACATCCTGATAAATTATTGAAGACGTCTAAGACATCCAGCAGCGATCAAATGTTAGGACAGAGATTCCTCAGAATACAGAAGGCATGGGAAATTCTCAGCAATTCAAGCTCTCGTTTTATTTATGATAATGAGCTGCTTGGTTCAAGGCAGAATGTGTTGGCTGCTGAGGTTTCAGAAGATGTAAACTTACAGGATATGATCGCTGAAGATGATGGAGAAGCACTAGAGCTCTTTCACCAGTGTAGGTGTGGTGTTTACTTCTCCAGAGACTCTACGGAATTGGGGAAAATGGGGTATTCATTGTTGAGGAATGGAAGTAGAATCTCTTTACTAACAGTTGATGCTTTACCAGGATCAGTGATTCTTCCCCGTGGATCATGTTCCCTAAAAACTTGTATACTAATCAAAATGGATGACTGTAATTGA 549 0.3971 MPIGIKSELVDLETHYNVLNVKEDASYEEIRASYCSAIHSLHPDKLLKTSKTSSSDQMLGQRFLRIQKAWEILSNSSSRFIYDNELLGSRQNVLAAEVSEDVNLQDMIAEDDGEALELFHQCRCGVYFSRDSTELGKMGYSLLRNGSRISLLTVDALPGSVILPRGSCSLKTCILIKMDDCN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2644 182 Gene3D DPH Zinc finger 91 182 IPR036671 -
Glsi02g2644 182 CDD DnaJ 14 75 IPR001623 -
Glsi02g2644 182 PANTHER DPH3 HOMOLOG-RELATED 14 173 IPR044248 GO:0017183|GO:0046872
Glsi02g2644 182 SUPERFAMILY Chaperone J-domain 10 86 IPR036869 -
Glsi02g2644 182 Gene3D DnaJ domain 5 90 IPR036869 -
Glsi02g2644 182 SMART dnaj_3 13 78 IPR001623 -
Glsi02g2644 182 Pfam DnaJ domain 14 83 IPR001623 -
Glsi02g2644 182 PRINTS DnaJ domain signature 16 34 IPR001623 -
Glsi02g2644 182 PRINTS DnaJ domain signature 34 49 IPR001623 -
Glsi02g2644 182 PRINTS DnaJ domain signature 58 78 IPR001623 -
Glsi02g2644 182 ProSiteProfiles dnaJ domain profile. 14 86 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2644 Glsi-ChrGlsi02 76069270 76070196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2644 15 83 C2H2 Transcription Factor Family AT1G74250 36.232 5.51e-07 47.0