Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2642 ATGGGTTCATTCTCTCGTACTTGTGAAATAGTTGAAGCAAGGGAAGAGCTAAATACAGGGGAAATCACAGGGGTTTATAAGCTCAACTCTGTGTTTAGCGTGGCTGAGAAAAATCAGAATCTTTCGGTGCTGAAACTGGGACACAAGGATAATCTAGACAATGAGATTAATAGGTTGTTTGAATCAATTAATCTTAAAACTTTATCAAGGGATTTGAGCCTTTTACAAAATGGTTCAAGCCCTAAGATGAAAAATGTGTTAAAAAAGCCAATAACTGCTGGCGTTTCTCAGTCCCCAAGGGTTGGGACATCTGAGGCTGTGACTTTGAAGCAGGCATTAAAAGACCTATGCATATCTAAGGCATCAGAAAATGCTGCTACGAAACGTTTATCCAAGCTGACAGCTTCTCCTAGAGTATCTGAGGTTGGTAAGATAAAGACATTGTACAATTCAGTTATAACTGAAGCTGGTCATTCAAGGCCTTCTTCTATAGAGACTAAAGGGGTTAAAAGTAAATTATCTCTATTACCAGAAGAAAGCAAATCAGTTTCCATGGAGAAAACGTCCCAGTCTCATCCAACCGCCAAAATCACATTATCAAGCCAAGCTGTTCATTCTTCTGCTTCAATTGCTATTGCAACTACACAAAATGATACTGAGACTTCACTGATGCAAAGCGATTTGGTATGTTCATCATCAAGTAAAGTCGGGGTTCAATCACTGCAATTGGAGCCTTGTCAAACAGGAAAAAAAACATCTGCACCTACTCCATCTCTTTCTAATACTAATAGAAATAAATTAGAGTTGCCTGAGAACGCTTATGCCTCTAAGAAACTAGGAAATAAAGTATCTGTGTCAAAAACTGGGCGGAAAGGTAGGGGTACGGTCTTGGTCATTAGGAACAAGAACTTGAGTAAGAAGAAACTAAAGCAGGACTCATGTTCAGCTTTAAGTACTCCTATGTCCAATGAAATTAATAATACATCGGTTCCTGGTTCAACTCAACTGGTTTGTGAGAGGTGCCGGTGTACTTTAGAGAATACAAGCAAAATAAACAGCCAATATACTATAGCATCGGACTCTACCATTGCTGGAGATGGAGTTAGCTTGAATAATGTACACTCTGGTGCAAATAAGCCTGGTTTGACATCAAGTAGCTGTAATTTAAGCAGATCAGTTGCAAAAGTGAAAAAGACTGCCAGATTGAAAGAACAACTTGAATTTTCACTAAGTTCAAAGAGTAGCCAAGGTGAGTACAGTAGTAGTACGTGTACCAGTGATGAGAGCAATGTGAGTGGGTCTAGTTGTGGCAATAGGCCTCACATGTCAAAGGATGTTAGGTGGGAAGCCATACGTCATGCTCAAATGCAGCATGGAATCTTGGGTTTGAGACACTTCAATCTTTTAAAGAAACTTGGTTGTGGAGATATTGGGACTGTATATCTTGCTGAACTAGTTGACACAAATTGCTTATTTGCTATCAAGGTCATGGATAATGAATTTTTGGCTAGAAGGAAGAAGATGCCTAGGACTCAAAATGAAAGAGAAATATTAAGGATGCTGGACCATCCTTTTCTTCCTACACTATATGCCCAATTCACATCAGATAATCAGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGAAGTTTTTCTGAGCCAGCAGCAAGGTTTTATGTTGTTGTTTACCAGATTGACATCACATGTCAGAACTTGGAATCATATGCTTTCCTTAAGTTATTGGACCCATCAGTTACAGAAGAGGCACTATCTATTTCTGAAATTTGCAGATTTCTAGCCTTGCTAAAAGTTTCTTGTATTTATTGTGACTTGAAATCAGTAATTGACACAAACATGGGACATGCCCAAATCTAG 1911 0.3914 MGSFSRTCEIVEAREELNTGEITGVYKLNSVFSVAEKNQNLSVLKLGHKDNLDNEINRLFESINLKTLSRDLSLLQNGSSPKMKNVLKKPITAGVSQSPRVGTSEAVTLKQALKDLCISKASENAATKRLSKLTASPRVSEVGKIKTLYNSVITEAGHSRPSSIETKGVKSKLSLLPEESKSVSMEKTSQSHPTAKITLSSQAVHSSASIAIATTQNDTETSLMQSDLVCSSSSKVGVQSLQLEPCQTGKKTSAPTPSLSNTNRNKLELPENAYASKKLGNKVSVSKTGRKGRGTVLVIRNKNLSKKKLKQDSCSALSTPMSNEINNTSVPGSTQLVCERCRCTLENTSKINSQYTIASDSTIAGDGVSLNNVHSGANKPGLTSSSCNLSRSVAKVKKTARLKEQLEFSLSSKSSQGEYSSSTCTSDESNVSGSSCGNRPHMSKDVRWEAIRHAQMQHGILGLRHFNLLKKLGCGDIGTVYLAELVDTNCLFAIKVMDNEFLARRKKMPRTQNEREILRMLDHPFLPTLYAQFTSDNQSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVVVYQIDITCQNLESYAFLKLLDPSVTEEALSISEICRFLALLKVSCIYCDLKSVIDTNMGHAQI 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2642 636 ProSiteProfiles Protein kinase domain profile. 466 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2642 636 SUPERFAMILY Protein kinase-like (PK-like) 441 572 IPR011009 -
Glsi02g2642 636 Pfam Protein kinase domain 467 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2642 636 MobiDBLite consensus disorder prediction 177 200 - -
Glsi02g2642 636 SMART serkin_6 466 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2642 636 MobiDBLite consensus disorder prediction 414 438 - -
Glsi02g2642 636 FunFam Serine/threonine-protein kinase D6PK-like 464 549 - -
Glsi02g2642 636 PANTHER FLIPPASE KINASE 1-RELATED 213 572 - -
Glsi02g2642 636 MobiDBLite consensus disorder prediction 156 200 - -
Glsi02g2642 636 Gene3D Phosphorylase Kinase; domain 1 460 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2642 Glsi-ChrGlsi02 76047131 76052657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2642 1 573 AGC Kinase Gene Family AT3G52890 43.053 9.65e-128 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Glsi02g2642 Pkinase 6.2e-16 CL0016