Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2639 ATGAAGTATATTGCTGCGTATTTGCTGGCTGTGCTGGGGGGCAACGCCATCCCTTCCGCCGACGATCTTAAGAACATACTGAGCTCTGTGGGAGCCGAAGTTGATGACGATAAGATCGACTTTCTTTTGTCCGAAATAAAAGGTAAAGATATAACTGAGCTTATTGCCAGCGGTAGGGAAAAGTTGGCCTCAGTGCCTTGTGGTGGAGGTGGTGCAGTTGCAGTGGCTGCTGCTCCTGGGGGAGGTGGTTCCGCTGCTGCTCCAGCTGCAGCCGAGACAAAGAAAGAGGAGAAGGTGGAGGAGAAAGAGGAATCTGACGATGACATGGGCTTCAGTCTCTTTGATTAA 348 0.5086 MKYIAAYLLAVLGGNAIPSADDLKNILSSVGAEVDDDKIDFLLSEIKGKDITELIASGREKLASVPCGGGGAVAVAAAPGGGGSAAAPAAAETKKEEKVEEKEESDDDMGFSLFD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2639 115 Gene3D - 1 59 IPR038716 -
Glsi02g2639 115 MobiDBLite consensus disorder prediction 79 115 - -
Glsi02g2639 115 Pfam 60s Acidic ribosomal protein 18 114 - -
Glsi02g2639 115 Hamap 50S ribosomal protein L12 [rpl12]. 2 115 IPR027534 GO:0003735|GO:0005840|GO:0006414
Glsi02g2639 115 FunFam 60S acidic ribosomal protein P2 1 59 - -
Glsi02g2639 115 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
Glsi02g2639 115 CDD Ribosomal_P2 1 115 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2639 Glsi-ChrGlsi02 76031593 76032629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2639 1 115 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 63.478 2.86e-31 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2639 02 76031593 76032629 Glsi02g2639 02 76031593 76032629 ECH