Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2597 ATGTCCCTCGTTCTTCCGAATCCCCCTTCTCCATTCCACTCTCCGACCCACCACCAAAACCTGAGACCCATACCCTTTTTTCCCCCCACTCAACGAAACCCAAAACTCCCTCATATTCGAGTTTCCTTTACAATTCTTAACACCACCAAGCATCCTTCCATTGTTCCTTCGAACGGTAAAACCTCCGAAAGTCACTCACTTTCTCAGACTTTTCAATTCCTCAAACCTTGGCTTCTCTCTGAGCAAAAAACCATTATCTTGGGCTGGCTCTGCAGCGCCATATCTGTCTACTCCCTCTCTAGAATCGTTTCTAAAGTAGGAAAAGTTTCTGCTACAGTCAACAACATTGATGCTATCAAGTTGCGAGACGAAGGTTTAGTATTGGGGGCTTTGGTGATTACCCGCTTGGTTGCGAGCTATGGGCAGCAAGCCTTTCTATGGGAAGCTGCACTGAACGCGTTATATAAGCTTAGGGTTCATGTTTTCGACAGAGTTTTGGAGAGAGAATTGGGATATTTCGAAGGCAAGGATGGTATTTCTGCTGGGGATATTGCGTATCGGATCACTGCGGAAGCTTCGGAAGTTGCTGGTACTTTATATGCTGTCCTCAATACCATAATTCCCAGCTTTCTGCAGTTATCAGCAATGATGATGCAGATGTTGGTTATCAGTCCTGTACTTTCTCTGATTTCAGCTGTGGTTATTCCTTGTATGGTACTTGTTGTTGCCTTTCTTGGTCAGGAACTTCGTACAATATCTAGAAAGGCACATCTTAGCATTGCTACTCTCTCAGCATATCTAAATGAGGTCCTCCCTGCAATTCTTTCTGTGAAAGCAAACAATGCAGAGCCGTGTGAGAGTGCCAGATTTAAGCGGCTGGCTTATATTGACTTTTTTGAACAGCTGAGCAAGAAGAGGATGAAGGCAGTGATTCCTCAGATTATTCAAGCTATATATTTTGGAGTTCTTTTTGTACTTTGTGCTGGTTCATTGGTGGTTTCAAGAGGTTCATTTGATGGCTCTAGCTTAGCTTCATTTGTGACATCATTGCTTTTCCTGATTGAGCCAATCCAGGATGTGGGAAAAGCATACAATGAATTGAGGCAGGGTGAACCAGCTGTTGAGCGTTTGTTTGATCTGACCAGGTTCAAAGATAAGGTGGTGGAGAAACCAGATGCTGTTACTTTAGACTACGTTAGTGGGGAGCTGAAATTTTGTGATGTCTCATTTAAGTATGATGATGACATGTCACTTGTTATAAATGGATTGAACCTTCACCTCAGAGCTGGAGAGATAGTTGCTCTTGTGGGTCCCTCTGGTGGAGGGAAGACAACACTTGTAAAACTGTTGCTTCGTCTTTATGATCCTATAGCTGGCTGTATACTGATTGATAATCATAACATCCAAAGCATTCGGTTGCAAAGTTTACGAAGACATGTTGGTCTTGTTTCTCAAGATATAATGCTTTTTTCAGGAACAGTTGCTGAAAACATTGGTTATAGGGATATGATGACAAAAATTGACATGGAGAGGGTAAAGCATGCAGCACAAACTGCTAATGCTGATGAGTTTATTAGAGAACTTCCAGAAGGATACAAAACCAATATTGGACCAAGGGGTTCAGCTTTAAGTGGAGGCCAGAGGCAAAGGTTAGCTATTGCAAGGGCACTCTATCAGAATTCTTCTATATTAATATTGGATGAGGCAACTTCTGCTTTAGACAGTAAATCTGAGTTATTGGTGAGACAAGCTGTAGAGCGTTTGATGAAAAATCACACCGTGCTGGTTATTGCCCATCGTATGGAAACAGTTCTGATGGCTAAACGAATATTCCTCTTGGATAAGGGAAAGCTAGAAGAGTTGCCTCGACCAACCATATTGGGCGGTCATAAGGACTCATTGCTATCATCTGGGGTTGTGATTTGA 1926 0.4258 MSLVLPNPPSPFHSPTHHQNLRPIPFFPPTQRNPKLPHIRVSFTILNTTKHPSIVPSNGKTSESHSLSQTFQFLKPWLLSEQKTIILGWLCSAISVYSLSRIVSKVGKVSATVNNIDAIKLRDEGLVLGALVITRLVASYGQQAFLWEAALNALYKLRVHVFDRVLERELGYFEGKDGISAGDIAYRITAEASEVAGTLYAVLNTIIPSFLQLSAMMMQMLVISPVLSLISAVVIPCMVLVVAFLGQELRTISRKAHLSIATLSAYLNEVLPAILSVKANNAEPCESARFKRLAYIDFFEQLSKKRMKAVIPQIIQAIYFGVLFVLCAGSLVVSRGSFDGSSLASFVTSLLFLIEPIQDVGKAYNELRQGEPAVERLFDLTRFKDKVVEKPDAVTLDYVSGELKFCDVSFKYDDDMSLVINGLNLHLRAGEIVALVGPSGGGKTTLVKLLLRLYDPIAGCILIDNHNIQSIRLQSLRRHVGLVSQDIMLFSGTVAENIGYRDMMTKIDMERVKHAAQTANADEFIRELPEGYKTNIGPRGSALSGGQRQRLAIARALYQNSSILILDEATSALDSKSELLVRQAVERLMKNHTVLVIAHRMETVLMAKRIFLLDKGKLEELPRPTILGGHKDSLLSSGVVI 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2597 641 FunFam ABC transporter related 72 383 - -
Glsi02g2597 641 ProSitePatterns ABC transporters family signature. 543 557 IPR017871 GO:0005524|GO:0016887
Glsi02g2597 641 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 77 620 IPR039421 -
Glsi02g2597 641 Gene3D - 396 637 IPR027417 -
Glsi02g2597 641 FunFam ABC transporter ATP-binding protein 396 637 - -
Glsi02g2597 641 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 621 IPR027417 -
Glsi02g2597 641 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 86 369 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi02g2597 641 Pfam ABC transporter transmembrane region 91 356 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi02g2597 641 SMART AAA_5 429 617 IPR003593 GO:0016887
Glsi02g2597 641 SUPERFAMILY ABC transporter transmembrane region 76 382 IPR036640 GO:0005524|GO:0016020
Glsi02g2597 641 CDD ABC_6TM_exporters 125 377 - -
Glsi02g2597 641 Gene3D ABC transporter type 1, transmembrane domain 56 382 IPR036640 GO:0005524|GO:0016020
Glsi02g2597 641 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 640 IPR003439 GO:0005524
Glsi02g2597 641 Pfam ABC transporter 421 571 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2597 Glsi-ChrGlsi02 75750284 75755151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2597 126 638 Calmodulin-binding Proteins AT2G36910 29.456 6.47e-56 204