Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2593 ATGCTAGGGAAGAAGATGGTGTCGATCAAGAAGCTAGCGAAAAAGGTCAAGGCAGTCGGAGGAGTTGACCCTGACCCTGCTCACTATGAGTGTTTGTTGAAGGGATATGCAGAAGGATCCCCTTCCAACATCACCCCAACAGGTTTTTTTGCACTTTACGTGGGGGAGGAGCGCCAAAGATATGTGGTTCCAACCACCTACCTTTCTCACCCTTTGTTCAAGATCTTGTTAGAGAAGGCTTACGATGAATTTGGGTTTGAGCAGAGGAATGGTCTCGTAGTTCCATGCAGTGTTTCCACTTTTCAGGAGGTCGTAAATGCTATAGAATGCAACAATGGCAAGTTTGACTTGGGCAAAATTTTTGAGGAGTTTATTTGA 378 0.4524 MLGKKMVSIKKLAKKVKAVGGVDPDPAHYECLLKGYAEGSPSNITPTGFFALYVGEERQRYVVPTTYLSHPLFKILLEKAYDEFGFEQRNGLVVPCSVSTFQEVVNAIECNNGKFDLGKIFEEFI 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2593 125 Pfam Auxin responsive protein 38 107 IPR003676 GO:0009733
Glsi02g2593 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2593 Glsi-ChrGlsi02 75736589 75736966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2593 41 111 Calmodulin-binding Proteins AT5G20810 50.704 9.86e-22 83.6