Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2583 ATGCCACCGGGTTATCGTTTCTACCCAACTGAAGAGGAGCTGATTTCATTCTATCTCCACAATAAGCTCGAAGGAGAGAGGGACGACATGAATCGGGTTATACCTGTGGTTGATATATATGACTACAACCCATGGCAACTCCCACAGGTTTCGGGAGAGGCGAGCCTGAGAGACACTGAGCAATGGTTCTTCTTCATTCCAAGGCAAGAAAGTGAAGCCCGTGGAGGGAGACCGAAGCGGCTCACAACTACTGGGTACTGGAAGGCCACTGGGTCTCCAAACCATGTCTATTCCTCTGATAATCGCATCATTGGCATGAAAAGAACCATGGTTTTTTATAACGGAAGGGCTCCAAACGGAAGGAAAACCGAGTGGAAGATGAATGAGTATAAGGCCATCAAAGGAGATGCCCCCACTTCAAGTATGTTAAGGCAGGAGTACAGTTTATGCAGAGTGTACAAGAAATCAAAGTGCTTGAGGGCATTTGATAGACGGCCACCGCCAAGGAGGGATATGGCTATCCATCCTAATCCTAATGTTCAGATTCAAAAGGTTAAAGATGAGGGTTCAACATCCTATGATCCCCATAACCCTCCTCAAATAGTGGAGAGATTAGGTATAACAAGCTCACCAGAAAGTTCATCCTCTGGAGACCATGGCCAACCTTCCCACAGTAAGGAAGCTGGTCAAATGGAGGTGGACGAGGAGCCCTTGTTGGATTGGGAGCAAGTGGATTGGTTTCTCGGGATGAATGAACCATGA 762 0.4724 MPPGYRFYPTEEELISFYLHNKLEGERDDMNRVIPVVDIYDYNPWQLPQVSGEASLRDTEQWFFFIPRQESEARGGRPKRLTTTGYWKATGSPNHVYSSDNRIIGMKRTMVFYNGRAPNGRKTEWKMNEYKAIKGDAPTSSMLRQEYSLCRVYKKSKCLRAFDRRPPPRRDMAIHPNPNVQIQKVKDEGSTSYDPHNPPQIVERLGITSSPESSSSGDHGQPSHSKEAGQMEVDEEPLLDWEQVDWFLGMNEP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2583 253 MobiDBLite consensus disorder prediction 183 223 - -
Glsi02g2583 253 Pfam No apical meristem (NAM) protein 2 131 IPR003441 GO:0003677|GO:0006355
Glsi02g2583 253 SUPERFAMILY NAC domain 1 155 IPR036093 GO:0003677|GO:0006355
Glsi02g2583 253 ProSiteProfiles NAC domain profile. 1 155 IPR003441 GO:0003677|GO:0006355
Glsi02g2583 253 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 211 - -
Glsi02g2583 253 Gene3D NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Glsi02g2583 253 MobiDBLite consensus disorder prediction 161 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2583 Glsi-ChrGlsi02 75649651 75651331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2583 4 246 NAC Transcription Factor Family AT5G22380 49.798 6.86e-76 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi02g2583 NAM 6e-32 No_clan