Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2557 ATGTGGAATCCTTCTTGGTTTCGTCGCGGTAACAGAGAAGTGGCTTGTTCGGCGGCAATGGCTGCTGTCTCGTCGTCATTAAGGCACATTGCCATTAGCTCACATTCACTCTGGTATCGAACAACCGAAGAAATGTCCATCTCTGACCCTCCGCCACCGCCACCGCCACTCCATCCATATGTCGTCACCCGCTCAGTATGGTCTGCCAATCTGGAGTTCGAGTTTCAGTTGATTCGATCCGTCATCGACTCATACCCTCTCATCTCCATGGATACTGAATTTCCAGGCGTACTTGTCCGTCTCGAAGCCGCCCATCCCTACTTCCATCATCGGCAACCCACCGCTCAGTATGCTGTTCTTAAAGCCAACGTAGATCGTTTGCACTTGATACAGATCGGCCTTACGCTTTCTGACGACGAGGGCAACCTTCCCACCCTGGGCACAGCCAATTTGTACATCTGGGAATTCAATTTTAGAGATTTTGATGTCGCTCGCGACGCCCACGCTCACGACTCGGTTGAGTTGTTAAGGCGCCAGGGCATCGATTTCGAGAAGAACAGGGAGTTTGGCATCGACTCGGTGCGATTCGCTGAGTTGATGATGTCATCAGGCATCGTGTGCAATGACGCAGTCAGCTGGGTGACGTTTCACTGTGCCTATGACTTCGGCTACCTAGTGAAGTTGCTGATGCAGCGAACTTTGCCGAATGACTTGGTCGACTTCATCCGTCTAGTGAGGGTGTTTTTCGGGGATAGGGTTTTTGATGCCAAGCACCTCATGAGGTTCTGCTCCAACCTACACGGTGGGTTGGACCGAGTTTGCCAGTCTCTGAATGTGGAACGAGTTGTAGGGAAAAGCCATCAGGCCGGTTCAGATAGCCTGCTCACTTTACGTGCTTTTCAGAAAATCAGGGAGGTTTACTTTGGCAAGGAAGATGGGATAGTCAAGTATGCTGGCGTCTTGTATGGTTTAGAGGTTTTCTAA 984 0.5081 MWNPSWFRRGNREVACSAAMAAVSSSLRHIAISSHSLWYRTTEEMSISDPPPPPPPLHPYVVTRSVWSANLEFEFQLIRSVIDSYPLISMDTEFPGVLVRLEAAHPYFHHRQPTAQYAVLKANVDRLHLIQIGLTLSDDEGNLPTLGTANLYIWEFNFRDFDVARDAHAHDSVELLRRQGIDFEKNREFGIDSVRFAELMMSSGIVCNDAVSWVTFHCAYDFGYLVKLLMQRTLPNDLVDFIRLVRVFFGDRVFDAKHLMRFCSNLHGGLDRVCQSLNVERVVGKSHQAGSDSLLTLRAFQKIREVYFGKEDGIVKYAGVLYGLEVF 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2557 327 Gene3D - 56 326 IPR036397 GO:0003676
Glsi02g2557 327 SUPERFAMILY Ribonuclease H-like 58 325 IPR012337 -
Glsi02g2557 327 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 61 325 IPR039637 GO:0004535|GO:0030014
Glsi02g2557 327 Pfam CAF1 family ribonuclease 66 191 IPR006941 -
Glsi02g2557 327 FunFam Putative CCR4-associated factor 1 7 56 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2557 Glsi-ChrGlsi02 75326682 75329133 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2557 02 75326682 75329133 Glsi11g1166 11 7298337 7299092 CCT
Glsi02g2557 02 75326682 75329133 Glsi12g0582 12 21196095 21196802 ECH
Glsi02g2557 02 75326682 75329133 Glsi02g2557 02 75326682 75329133 ECH