Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2545 ATGTCTACGAAACAAGCTCAACTGAACGGGGCCTACTACGGCCCCTCTATCCCACCGCTCAAGTCCTATCACCGCCCAGGCCGTGGCGACAACTGTGATTGTTGCTGCTGCTGGCTCTTCACCCTCATATTTCAAATCCTAGTAACCATCATCATTATCCTGGGTATCGCTGCGTTTGTGTTCTGGCTGGTCGTGCGCCCCACCGTGGTCAAGTTCTATGTCTCCGATGCCTCCCTCACCCAATTTAACTACACCAACAACACCCTCTCTTACAACCTTGCACTCAACATCACCATTCGCAACCCCAATAGAAAGCTTGGCGTCTACTACGACAAGATCGAAGCCAGGGCATTGTACCAGGATGCCAGGTTCGATTCTGTGCCTCTGAAGCCGTTCCATCAGGGCCACAAGACTACCGATGTACTCAGCCCTGCTTTCAGAGGTCAGCGCTTGCTATTCCTTGCTTCCCAACAGACTACGGAATTGAATAAGGAGAAGAGCTCTGGGATTTACAGTATCGATGTGAATCTCTATCTCAAGGTAAGGTTCAAGTTGGGAGCCTTGAGGACCCTCAAGTTGAAGCCCAAGGTTAAATGTGACTTGAAGGTTCCTCTCACTCCGAGAACTAATGGAACCTCACCCGCCGGTAGATTTGAGACCAAGAGGTGCCATCTCGATTACTGA 684 0.5058 MSTKQAQLNGAYYGPSIPPLKSYHRPGRGDNCDCCCCWLFTLIFQILVTIIIILGIAAFVFWLVVRPTVVKFYVSDASLTQFNYTNNTLSYNLALNITIRNPNRKLGVYYDKIEARALYQDARFDSVPLKPFHQGHKTTDVLSPAFRGQRLLFLASQQTTELNKEKSSGIYSIDVNLYLKVRFKLGALRTLKLKPKVKCDLKVPLTPRTNGTSPAGRFETKRCHLDY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2545 227 PANTHER OS05G0367900 PROTEIN 32 205 IPR044839 GO:0098542
Glsi02g2545 227 Pfam Late embryogenesis abundant protein 96 199 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2545 Glsi-ChrGlsi02 75236626 75237309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2545 64 206 SNARE and Associated Proteins AT1G32270 39.583 8.84e-30 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2545 02 75236626 75237309 Glsi02g2545 02 75236626 75237309 ECH