Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2542 ATGCCGATAGACACCAACTTAGCCTCCACCATTCATTATTCATCATATTCATATAATTCTATATCCTACAAGTCTACAAGTCTACAAGTAAATTCGGCGGCCGCCATGTCGGTGAAAGTGTGTGACCACCACTGCAAGAATAAGCGAAGGAAGATATTCCGCCGAATCTTTGCGGGTATCCTCATCTTCTTGTTCATAGTGCTGGTCACAATACTCTTAATCTGGGCAATTCTGCGGCCATCCAAGCCAGCCTGGATCCTCCAAGACGTCACCGTTTACGCCTTCAATGCCACCATCCCTAACTTCTTGACCTCTAGCTTCCAAGTAACCCTCTCTTCCCGCAATCCCAACGACAAGATCGGGATCTACTACGACCGCCTCGATGCCTACGTCTCCTACCAGAACCAGGAAATCACCTACCGCACATCAATCCCACCATCGTACCAGGGTCACAAGGAAGTCGACGTATGGTCACCCTTCGTCTACGGCACCAACGTCCCCGTAGCTCCCTACAACTCCGCGGGTCTGAGTCAGGATCAGTCCAACGGCAACCTCCTCGTCATCATCAAAATTGATGGGCGTGTCAGATGGAAAGTTGGGGCCTTCATTTCTGGTCATTACCATATCTACGTACGCTGCCCGGCCTTCATTACTTTCGGACCCCGGAGTAACGGAATTGTCGTCGGCAATAACGCAGTTAAGTATCAAATGGTCCAGCGATGCACTGTCAGCGTTTGA 738 0.5 MPIDTNLASTIHYSSYSYNSISYKSTSLQVNSAAAMSVKVCDHHCKNKRRKIFRRIFAGILIFLFIVLVTILLIWAILRPSKPAWILQDVTVYAFNATIPNFLTSSFQVTLSSRNPNDKIGIYYDRLDAYVSYQNQEITYRTSIPPSYQGHKEVDVWSPFVYGTNVPVAPYNSAGLSQDQSNGNLLVIIKIDGRVRWKVGAFISGHYHIYVRCPAFITFGPRSNGIVVGNNAVKYQMVQRCTVSV 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2542 245 PANTHER OS05G0367900 PROTEIN 53 234 IPR044839 GO:0098542
Glsi02g2542 245 Pfam Late embryogenesis abundant protein 110 213 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2542 Glsi-ChrGlsi02 75229270 75230161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2542 57 213 EF-hand Containing Proteins AT5G21130 20.382 1.94e-06 46.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2542 02 75229270 75230161 Glsi11g1179 11 7387876 7391142 CCT
Glsi02g2542 02 75229270 75230161 Glsi02g2542 02 75229270 75230161 ECH