Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2503 ATGGGTAACAACTGTGTTGGATCGAGAACTTCGAAGAATTCACTATTTCCCACTATTGCCAGTTCACTCTGGTGGCCAAGACCAACAGGGGGAATGGTTTCTCATACTGGTGGAGGAATTTCCGGCATACCATCATCTGTAACCAAAGAGACAAATGCCACAGAGACCACCCAAAACAGACCTCCAGAGGTGCTGAAAATTGATAAGGAGGAGACAAAACCAGTGAAAGAGACGAAGCAACCTCCACCCAAAAAACTGGACGAAGAGACTACTAAATCATCAGAGCCAACAAGGCACATGGAGGAGTCAACACTACCCGAATCGGTGAGGCATAAGGAAGAGAGTGGACCAGGTCCGACAACCGTACAAAAGGAAGAGATTAGACCAGTAGAGCCTGCAAAACGAAAGAAGCCCCATATTGTCAAGAAGCTAGCAACTGCTGGGCTTCAAGCGGAGTCGGTTTTGCAGACAAAAACTGGTCATCTTAAGGAGTTCTATAATTTGGGACGGAAGCTTGGACATGGGCAGTTTGGGACAACATTCCTTTGTGTGGAGAAAGCCACTGGTAAAGAGTATGGTTGCAAGTCTATTGCAAAAAGAAAATTGCTGACAGATGATGATGTGGAGGACGTGAGAAGGGAGATTCAGATAATGCATCACTTGGCAGGGTGTCCCAATGTGATCTCAATTAAAGGGGCTTATGAGGATGCTGTTGCCGTTCATGTTGTGATGGAATTGTGTGCAGGGGGTGAACTCTTTGATAGGATCGTGGAAAGGGGGCATTACACGGAAAGAAAGGCAGCAAAACTTGCGAGGACTATAGTTAGTGTTATAGAAGCTTGCCACTCCCTTGGAGTAATGCATCGTGATCTCAAGCCTGAGAATTTTCTTTTCGTTAATAAGGATGAAGAGTCGCCCCTTAAGGCAATTGATTTTGGGCTGTCCGCATTCTTCAAACCAGGAGACACTTTCACAGACGTGGTAGGAAGTCCTTACTATGTGGCGCCTGAAGTTCTGCGGAAGCGTTATGGTCCAGAAGCAGACGTGTGGAGTGCTGGTGTTATGATTTACATTCTTTTAAGCGGAGTTCCGCCATTTTGGGCTGAAACGGAGGAGGAGATATTCAAGGAGGTTTTGCATGGAGATCTTGATTTCTCATCAGATCCTTGGCCTAATATCTCCGAAAGTGCTAAAGACTTGGTTAGGAAGATGCTTGTTAGGAATCCAAGAAAACGGCTAACAGCCCATGAAGTTCTTTGTCATCCTTGGATTCAGGTTGATGGAGCAGCTCTTGACAAGCCTCTTGATTCTGCAGTTCTGAGTCGCCTGAAGCAGTTTTCTGCCATGAACAAGCTCAAGAAAATGGCTATTAGAGTCATTGCGGAGAATCTCTCTGAAGAAGAAATTGCTGGGTTGAAAGAAATGTTTAAGATGATAGACACAGACAACAGTGGCCAAATTACTTTCGAAGAACTTAAGAATGGGCTGAAAAGATTTGGTGCTAATCTCAATGAATCTGAAATATACGATCTAATGCAAGCTGCAGATGTTGATAACAGTGGCACGATTGACTATGGAGAATTCATAGCTGCAACATTGCATTTGAATAAAGTAGAGAGAGAAGATCATTTAGTTGCAGCTTTCTCATACTTTGACAAAGATGGAAGTGGCTACATCACCCCAGATGAGCTTCAACAGGCTTGTGAAGAATTTGGCATAGAAGATGTCCGCTTGGAGGATATTATCCGAGAAGCCGATCAGGATAATGATGGGCAAATAGATTACAATGAATTTGTGGCTATGATGCAGGGAGGCAGTACAGAGTTAGGTAATAAGGGTCAAAAGGGTAGCACTAGTTTTAAGATTGGATATAGTGAGGCACTGACGTCTTTGAATTCCTCAAGCTTCGGCTTAATCTCTACTCCAACTGATCGTGCTGCAAGCAACTAG 1950 0.4421 MGNNCVGSRTSKNSLFPTIASSLWWPRPTGGMVSHTGGGISGIPSSVTKETNATETTQNRPPEVLKIDKEETKPVKETKQPPPKKLDEETTKSSEPTRHMEESTLPESVRHKEESGPGPTTVQKEEIRPVEPAKRKKPHIVKKLATAGLQAESVLQTKTGHLKEFYNLGRKLGHGQFGTTFLCVEKATGKEYGCKSIAKRKLLTDDDVEDVRREIQIMHHLAGCPNVISIKGAYEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVSVIEACHSLGVMHRDLKPENFLFVNKDEESPLKAIDFGLSAFFKPGDTFTDVVGSPYYVAPEVLRKRYGPEADVWSAGVMIYILLSGVPPFWAETEEEIFKEVLHGDLDFSSDPWPNISESAKDLVRKMLVRNPRKRLTAHEVLCHPWIQVDGAALDKPLDSAVLSRLKQFSAMNKLKKMAIRVIAENLSEEEIAGLKEMFKMIDTDNSGQITFEELKNGLKRFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKVEREDHLVAAFSYFDKDGSGYITPDELQQACEEFGIEDVRLEDIIREADQDNDGQIDYNEFVAMMQGGSTELGNKGQKGSTSFKIGYSEALTSLNSSSFGLISTPTDRAASN 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2503 649 ProSitePatterns EF-hand calcium-binding domain. 552 564 IPR018247 -
Glsi02g2503 649 ProSitePatterns EF-hand calcium-binding domain. 586 598 IPR018247 -
Glsi02g2503 649 ProSitePatterns Protein kinases ATP-binding region signature. 172 199 IPR017441 GO:0005524
Glsi02g2503 649 MobiDBLite consensus disorder prediction 39 61 - -
Glsi02g2503 649 ProSiteProfiles Protein kinase domain profile. 166 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2503 649 Gene3D Phosphorylase Kinase; domain 1 168 251 - -
Glsi02g2503 649 Pfam EF-hand domain pair 472 532 IPR002048 GO:0005509
Glsi02g2503 649 Pfam EF-hand domain pair 543 603 IPR002048 GO:0005509
Glsi02g2503 649 MobiDBLite consensus disorder prediction 62 119 - -
Glsi02g2503 649 ProSiteProfiles EF-hand calcium-binding domain profile. 577 608 IPR002048 GO:0005509
Glsi02g2503 649 MobiDBLite consensus disorder prediction 33 138 - -
Glsi02g2503 649 ProSiteProfiles EF-hand calcium-binding domain profile. 503 538 IPR002048 GO:0005509
Glsi02g2503 649 SMART serkin_6 166 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2503 649 PANTHER SERINE/THREONINE-PROTEIN KINASE 156 598 - -
Glsi02g2503 649 ProSiteProfiles EF-hand calcium-binding domain profile. 539 574 IPR002048 GO:0005509
Glsi02g2503 649 Gene3D - 449 606 - -
Glsi02g2503 649 Pfam Protein kinase domain 166 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2503 649 CDD STKc_CAMK 165 423 - -
Glsi02g2503 649 SUPERFAMILY EF-hand 463 603 IPR011992 -
Glsi02g2503 649 SUPERFAMILY Protein kinase-like (PK-like) 165 425 IPR011009 -
Glsi02g2503 649 CDD EFh 543 603 IPR002048 GO:0005509
Glsi02g2503 649 ProSiteProfiles EF-hand calcium-binding domain profile. 467 502 IPR002048 GO:0005509
Glsi02g2503 649 FunFam Calcium-dependent protein kinase 1 168 251 - -
Glsi02g2503 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 286 298 IPR008271 GO:0004672|GO:0006468
Glsi02g2503 649 SMART efh_1 471 499 IPR002048 GO:0005509
Glsi02g2503 649 SMART efh_1 577 605 IPR002048 GO:0005509
Glsi02g2503 649 SMART efh_1 543 571 IPR002048 GO:0005509
Glsi02g2503 649 SMART efh_1 507 535 IPR002048 GO:0005509
Glsi02g2503 649 CDD EFh 472 531 IPR002048 GO:0005509
Glsi02g2503 649 ProSitePatterns EF-hand calcium-binding domain. 516 528 IPR018247 -
Glsi02g2503 649 ProSitePatterns EF-hand calcium-binding domain. 480 492 IPR018247 -
Glsi02g2503 649 Gene3D Transferase(Phosphotransferase) domain 1 252 448 - -
Glsi02g2503 649 FunFam Calcium-dependent protein kinase 1 432 606 - -
Glsi02g2503 649 FunFam Calcium-dependent protein kinase SK5 252 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2503 Glsi-ChrGlsi02 74921189 74926457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2503 1 606 EF-hand Containing Proteins AT3G10660 68.900 0.0 886
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Glsi02g2503 Pkinase 1.3e-72 CL0016