Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi02g2498 | ATGGAGGTTCCAGAGATGGAAGACAAGTCTGAAGGTCATATGACATCAGCTGCGGCCTTTGTGGAGGGGGGAATTCAAGAAGCCTGTGATGATTCTTGCAGCATATGCCTTGAGGATTTTTGTGAGAGTGATCCATCAACGGTTACTACATGCAAGCATGAGTTTCACCTGCAGTGCATTCTTGAATGGTGTCAGAGAAGCTCCCAGTGCCCTATGTGTTGGCAACTTATTAGTTTCAAGGATCATACCAGTCAAGAATTGCTTGAGGCAGTGGAGCAGGAAAGGAGCTTGAGGGTTACCCCATCAAGAAATGCTGCTATTTTCCATCATCCTGCCCTTGGTGATTTAGAATTGCCGCATTTACCCATGGGAGTAAATGATGCGGATATTGAAGAGCGGATAATTCAACATTTAGCTGCTGCTGCAGCTATGGGAAGAGCACACCACCTTGGTCGGAGGGAAGGGCATCGAACTAGGTCATCTGCTCAAGGTCGACAGTTCTTTGTATTCTCAACTCAGCCCAGTGCACCTCCATCTGGTCCTGGTTCAACTGCTGGAGGGGGGACTGAACCAGCTACAATTCCTGTAGGAAGTCCTTCTTCCCCACTTACATCTGAAGGAGATGAACCATCATGGCAGATCCCCCACATTCAAACTCAGAGTTCTTCTTTAGTGCCTGGATCTACTGTCATGGCAACAAATCATCAAGGACTTTCCTTTAATGATCGGGGCTCTGCTGTTCATTCTTCACTGCCCAACCAAGGTAGTGCAGGGCCATCAGAACTTCAGTCATTTTCTGAGTCTCTGCGGTCCAGACTTAGTTCAGCCTCCTTGAGATACAAGGAGTCAATTTCAAAGGGCGCTAGGGGATGGAAGGAAAGGCTGTTCTCTCTGTATCCCGATTGA | 906 | 0.4779 | MEVPEMEDKSEGHMTSAAAFVEGGIQEACDDSCSICLEDFCESDPSTVTTCKHEFHLQCILEWCQRSSQCPMCWQLISFKDHTSQELLEAVEQERSLRVTPSRNAAIFHHPALGDLELPHLPMGVNDADIEERIIQHLAAAAAMGRAHHLGRREGHRTRSSAQGRQFFVFSTQPSAPPSGPGSTAGGGTEPATIPVGSPSSPLTSEGDEPSWQIPHIQTQSSSLVPGSTVMATNHQGLSFNDRGSAVHSSLPNQGSAGPSELQSFSESLRSRLSSASLRYKESISKGARGWKERLFSLYPD | 301 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi02g2498 | 301 | MobiDBLite | consensus disorder prediction | 194 | 213 | - | - | |
Glsi02g2498 | 301 | ProSiteProfiles | Zinc finger RING-type profile. | 33 | 73 | IPR001841 | - | |
Glsi02g2498 | 301 | SMART | ring_2 | 33 | 73 | IPR001841 | - | |
Glsi02g2498 | 301 | MobiDBLite | consensus disorder prediction | 234 | 268 | - | - | |
Glsi02g2498 | 301 | SUPERFAMILY | RING/U-box | 25 | 80 | - | - | |
Glsi02g2498 | 301 | Pfam | Ring finger domain | 31 | 73 | IPR001841 | - | |
Glsi02g2498 | 301 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 15 | 78 | IPR013083 | - | |
Glsi02g2498 | 301 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 19 | 81 | - | - | |
Glsi02g2498 | 301 | MobiDBLite | consensus disorder prediction | 171 | 213 | - | - | |
Glsi02g2498 | 301 | FunFam | E3 ubiquitin-protein ligase RHF2A | 4 | 107 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi02g2498 | Glsi-ChrGlsi02 | 74888584 | 74891811 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi02g2498 | 30 | 82 | C3H Transcription Factor Family | AT4G00335 | 47.170 | 1.16e-12 | 63.9 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Glsi02g2498 | 02 | 74888584 | 74891811 | Glsi02g2498 | 02 | 74888584 | 74891811 | ECH |