Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2498 ATGGAGGTTCCAGAGATGGAAGACAAGTCTGAAGGTCATATGACATCAGCTGCGGCCTTTGTGGAGGGGGGAATTCAAGAAGCCTGTGATGATTCTTGCAGCATATGCCTTGAGGATTTTTGTGAGAGTGATCCATCAACGGTTACTACATGCAAGCATGAGTTTCACCTGCAGTGCATTCTTGAATGGTGTCAGAGAAGCTCCCAGTGCCCTATGTGTTGGCAACTTATTAGTTTCAAGGATCATACCAGTCAAGAATTGCTTGAGGCAGTGGAGCAGGAAAGGAGCTTGAGGGTTACCCCATCAAGAAATGCTGCTATTTTCCATCATCCTGCCCTTGGTGATTTAGAATTGCCGCATTTACCCATGGGAGTAAATGATGCGGATATTGAAGAGCGGATAATTCAACATTTAGCTGCTGCTGCAGCTATGGGAAGAGCACACCACCTTGGTCGGAGGGAAGGGCATCGAACTAGGTCATCTGCTCAAGGTCGACAGTTCTTTGTATTCTCAACTCAGCCCAGTGCACCTCCATCTGGTCCTGGTTCAACTGCTGGAGGGGGGACTGAACCAGCTACAATTCCTGTAGGAAGTCCTTCTTCCCCACTTACATCTGAAGGAGATGAACCATCATGGCAGATCCCCCACATTCAAACTCAGAGTTCTTCTTTAGTGCCTGGATCTACTGTCATGGCAACAAATCATCAAGGACTTTCCTTTAATGATCGGGGCTCTGCTGTTCATTCTTCACTGCCCAACCAAGGTAGTGCAGGGCCATCAGAACTTCAGTCATTTTCTGAGTCTCTGCGGTCCAGACTTAGTTCAGCCTCCTTGAGATACAAGGAGTCAATTTCAAAGGGCGCTAGGGGATGGAAGGAAAGGCTGTTCTCTCTGTATCCCGATTGA 906 0.4779 MEVPEMEDKSEGHMTSAAAFVEGGIQEACDDSCSICLEDFCESDPSTVTTCKHEFHLQCILEWCQRSSQCPMCWQLISFKDHTSQELLEAVEQERSLRVTPSRNAAIFHHPALGDLELPHLPMGVNDADIEERIIQHLAAAAAMGRAHHLGRREGHRTRSSAQGRQFFVFSTQPSAPPSGPGSTAGGGTEPATIPVGSPSSPLTSEGDEPSWQIPHIQTQSSSLVPGSTVMATNHQGLSFNDRGSAVHSSLPNQGSAGPSELQSFSESLRSRLSSASLRYKESISKGARGWKERLFSLYPD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2498 301 MobiDBLite consensus disorder prediction 194 213 - -
Glsi02g2498 301 ProSiteProfiles Zinc finger RING-type profile. 33 73 IPR001841 -
Glsi02g2498 301 SMART ring_2 33 73 IPR001841 -
Glsi02g2498 301 MobiDBLite consensus disorder prediction 234 268 - -
Glsi02g2498 301 SUPERFAMILY RING/U-box 25 80 - -
Glsi02g2498 301 Pfam Ring finger domain 31 73 IPR001841 -
Glsi02g2498 301 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 78 IPR013083 -
Glsi02g2498 301 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 19 81 - -
Glsi02g2498 301 MobiDBLite consensus disorder prediction 171 213 - -
Glsi02g2498 301 FunFam E3 ubiquitin-protein ligase RHF2A 4 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2498 Glsi-ChrGlsi02 74888584 74891811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2498 30 82 C3H Transcription Factor Family AT4G00335 47.170 1.16e-12 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2498 02 74888584 74891811 Glsi02g2498 02 74888584 74891811 ECH