Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2475 ATGAATCTTGGGTTTTCGTCCATAGAAACTCCGCTGCATTTAATATCTCTGGAGTCTGGACAAGTTATTCAGCAAAACCTTTTCCCATTTAGAATGTATACTCCAACTGAGATGGAGTCTCAGGTGAAGCATGCTGTGGTTGTTAAAGTTATGGGTCGTACTGGATCCAGAGGGCAGGTGACTCAGGTTAGAGTCAAGTTTTTGGATGATCACAACCGGTACATCATGAGGAATGTGAAAGGACCAGTGAGAGAAGGAGACATTCTCACGCTACTTGAATCTGAAAGGGAAGCAAGGAGAATTAAATCTTACTTTGCTTTGCCTTTGTGTCTTAAGCTCGGTATAGTTGGGTCTCGGCAGCTCTCGGTGACGCGCCCTTTTCCCCTCTCAGCTGCTGCTGCCGCCCCCGTCTGCATCTGTTTTCGTGGACTCTCTCGTTTAATTGCTTATAAAGCTATGGCTGCTGCTGTGGCGGTTCCTAGTGAAGGTGTGTTGAATCAAGATTTGACCCAGATTGAGGTGAAGCTCTTTAATCGGTGGAGCTTCGATGACGTTCAGGTTAATGACATTTCTCTGGCTGATTATATCGGAGTTGCTGCATCCAAGCATGCAACATATGTTCCTCACACTGCTGGTAGGTACTCAGTAAAGCGATTCAGGAAAGCCCAGTGCCCAATTGTGGAGAGGCTTACCAATTCTCTGATGATGCATGGTAGAAACAATGGGAAGAAATTAATGGCTGTGAGAATTATCAAACATGCTATGGAAATTATTCATTTGCTAACTGATCAGAATCCCATTCAAGTTATTGTTGATGCCGTGATTAACAGTGGTCCTCGTGAAGATGCAACTCGAATTGGCTCTGCTGGGGTTGTTAGGAGACAGGCTGTGGATATATCACCCCTGCGCCGCGTTAATCAGGCCATCTATCTTCTAACAACGGGTGCACGTGAAGCCGCTTTCAGAAATAGTAAGACAATTGCTGAAAGCTTGGCTGATGAACTTATTAATGCAGCAAAGGGTTCATCCAACAGCTATGCCATCAAGAAAAAGGATGAGATTGAGAGAGTTGCCAAGGCCAATCGTTAA 1089 0.45 MNLGFSSIETPLHLISLESGQVIQQNLFPFRMYTPTEMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDHNRYIMRNVKGPVREGDILTLLESEREARRIKSYFALPLCLKLGIVGSRQLSVTRPFPLSAAAAAPVCICFRGLSRLIAYKAMAAAVAVPSEGVLNQDLTQIEVKLFNRWSFDDVQVNDISLADYIGVAASKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNSKTIAESLADELINAAKGSSNSYAIKKKDEIERVAKANR 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2475 362 ProSitePatterns Ribosomal protein S28e signature. 93 101 IPR028626 -
Glsi02g2475 362 SUPERFAMILY Ribosomal protein S7 175 362 IPR036823 -
Glsi02g2475 362 CDD uS7_Eukaryote 175 362 IPR005716 GO:0003735|GO:0006412|GO:0015935
Glsi02g2475 362 Pfam Ribosomal protein S28e 41 101 IPR000289 GO:0003735|GO:0005840|GO:0006412
Glsi02g2475 362 Gene3D Ribosomal protein S7 domain 157 362 IPR036823 -
Glsi02g2475 362 ProSitePatterns Ribosomal protein S7 signature. 228 254 IPR020606 GO:0003723|GO:0003735|GO:0006412
Glsi02g2475 362 Gene3D - 35 102 IPR012340 -
Glsi02g2475 362 FunFam 40S ribosomal protein S28 36 102 - -
Glsi02g2475 362 Pfam Ribosomal protein S7p/S5e 216 362 IPR023798 -
Glsi02g2475 362 Hamap 30S ribosomal protein S28e [rps28e]. 38 102 IPR000289 GO:0003735|GO:0005840|GO:0006412
Glsi02g2475 362 PANTHER RIBOSOMAL PROTEIN S7 154 362 IPR000235 GO:0006412
Glsi02g2475 362 CDD S1_S28E 43 102 IPR000289 GO:0003735|GO:0005840|GO:0006412
Glsi02g2475 362 FunFam 40S ribosomal protein S5 158 362 - -
Glsi02g2475 362 NCBIfam 30S ribosomal protein S7 173 362 IPR005716 GO:0003735|GO:0006412|GO:0015935
Glsi02g2475 362 SUPERFAMILY Nucleic acid-binding proteins 38 102 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2475 Glsi-ChrGlsi02 74702950 74713383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2475 153 362 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 86.667 9.54e-131 371