Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2465 ATGTCACGCTTGCAGTTGTTGAGGCGTTGGAGCAGGTTGGATTCACCATTTACAATAGCAAATTGCGGAAAGAGACTTCAACTCTTGGTCTTCTCTTTTTCCACCACTACCTCAGTAGAGCATGATAATCCGAGTCCACCCGCTCCGCCTCCTATTCGAGTGGGCTTCACCGAGTCGGCTGGGCGTGGTGTATTCGCCACTCGGGGAATCGGAGCTGGAGATCTCATCCACACGGCCAAACCCTTTGTGTGTCACCCCTCTCTCCCCGCTATCCACTCCGTTTGTTACTTTTGCCTCAGAAAGCTAGGAAATTTGACCAATCCTAAAGCTCCTGGTGTATCATTTTGTAGTGAGCAATGCAAAGAACGTTCTAAGGAGTTTTATGATGTTGAGATGAAAGCGAACTGGATGGTGTTTGATGACTATTTCAGGACCCGAGGTTTGAAATTTCCATTTCTGGTAAAGCGATTGGCTTGCATGGTCATATCCGGAGTTGCTAGCATGGACAGCCTTGACATACTTCGACCTGCCAGTTTGACTCCTGAGATGATATCAAAGATGGAAGAGGGGTTTTCCTTGCTAAGGAATGCCTTCACGATGACACTTATTGCAGATGAAGATATTGCTTTTCTAAGCAAGCAATGGTACATTAGCGTTCTGGCAAGAATTCGTATTAATGCATTCCGAGTTGAATTGGCTGGAGGTTTGTATGAAGATCTTCTTTCATCCGCAGTTGCATCTGTAGAAGGTGAAGCTGCTGTTGGAAATGCTGTTTATATACTTCCGTCCTTCTACAATCACGACTGTGATCCTAATGCACATATTATATGGATAGATAATGCAGAAGCAAAATTGAAGGCCCTCCGTAATGTTGAGGCAGGTGAAGAACTCAGAATCAGCTACATTGATGCCAGCCTGGACCGTGATGCTCGGCAAGAACTGTTGCTTCGAGGCTTTGGTTTCCCTTGTAATTGCAATAGATGCTTACAAGGCGACTAA 999 0.4555 MSRLQLLRRWSRLDSPFTIANCGKRLQLLVFSFSTTTSVEHDNPSPPAPPPIRVGFTESAGRGVFATRGIGAGDLIHTAKPFVCHPSLPAIHSVCYFCLRKLGNLTNPKAPGVSFCSEQCKERSKEFYDVEMKANWMVFDDYFRTRGLKFPFLVKRLACMVISGVASMDSLDILRPASLTPEMISKMEEGFSLLRNAFTMTLIADEDIAFLSKQWYISVLARIRINAFRVELAGGLYEDLLSSAVASVEGEAAVGNAVYILPSFYNHDCDPNAHIIWIDNAEAKLKALRNVEAGEELRISYIDASLDRDARQELLLRGFGFPCNCNRCLQGD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2465 332 Coils Coil 278 298 - -
Glsi02g2465 332 Gene3D SET domain 63 328 IPR046341 -
Glsi02g2465 332 Gene3D - 146 227 - -
Glsi02g2465 332 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 48 330 - -
Glsi02g2465 332 SUPERFAMILY SET domain 49 328 IPR046341 -
Glsi02g2465 332 SMART set_7 50 308 IPR001214 GO:0005515
Glsi02g2465 332 CDD SET_SMYD 241 328 - -
Glsi02g2465 332 Pfam SET domain 61 301 IPR001214 GO:0005515
Glsi02g2465 332 Gene3D - 94 145 - -
Glsi02g2465 332 ProSiteProfiles SET domain profile. 50 302 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2465 Glsi-ChrGlsi02 74619229 74623292 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Glsi02g2465 SET 6.5e-13 No_clan