Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2451 ATGGACAAGTCTGACAGAGAGACCCATGACTTCATGAATGTTGAATCATTCTCTCAGCTCCCTTTTATCCGTCCTGCACCTGTCAAAGAAAAGGGCATTAGGCTTTTCGGCATAGAATTTGGCAGCGGCGACGCCCGTACCGCCACTGACGACGCCGAGTCGGGGGACACAACTAATAATGCTTTTGAGGTTGATAACAAGGACAACAACAGCTCTGCCGAGAACGGGGAAACTAGCCGGAGATTTGAATGCCATTACTGCTGTAGAAACTTCCCTACTTCTCAAGCCTTGGGTGGCCACCAAAACGCCCATAAACGAGAGCGTCAGCACGCCAAACGAGCACACCTTCAGTCAGCTATGGTACACAATACCCTCTCCGACGCCCAATACTACGGCCTTACGAACTACAGGCTCAGTTCAACAGCTCCAACACCAGCAATGCCTTATCCAACATGGAATAGTAGTTCAACTGCTATTGCTACTAATACTAGTGGAAGAATATATGGTAGCTCATATCCTCATCATCTGCAACCTATCAATGGGAGCCCCTTGGGCTTGTGGCCAGTGCCCACCGTCCAAAGTAGCCCTACTTTCATCCGTGGCCGTTCCTTGCATCCGTCGCCCTTGTTTGCTGGCCGAGAAATTAACATCAGGGCTTCACAAGTTGCAGGGTCGGCTTCACAAAATCGGTTCGTTTATGACTCCAAACCCAGCGTCCAAGATCATGTGAGTTTGGATCTTCATCTAAAAGAAAGTGATATTTCCATGCCATTTGCAGGCAGCGATGCAGCAGCTACCATACAGCTTGCCAAACTTCAATACTCGTATATAGATGCTCCTTTTGCAATTTATAGATAG 858 0.4825 MDKSDRETHDFMNVESFSQLPFIRPAPVKEKGIRLFGIEFGSGDARTATDDAESGDTTNNAFEVDNKDNNSSAENGETSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNTLSDAQYYGLTNYRLSSTAPTPAMPYPTWNSSSTAIATNTSGRIYGSSYPHHLQPINGSPLGLWPVPTVQSSPTFIRGRSLHPSPLFAGREINIRASQVAGSASQNRFVYDSKPSVQDHVSLDLHLKESDISMPFAGSDAAATIQLAKLQYSYIDAPFAIYR 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2451 285 Gene3D Classic Zinc Finger 57 132 - -
Glsi02g2451 285 MobiDBLite consensus disorder prediction 52 76 - -
Glsi02g2451 285 PANTHER ZINC FINGER PROTEIN GIS 1 249 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Glsi02g2451 285 MobiDBLite consensus disorder prediction 44 76 - -
Glsi02g2451 285 SUPERFAMILY beta-beta-alpha zinc fingers 79 110 IPR036236 -
Glsi02g2451 285 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Glsi02g2451 285 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2451 Glsi-ChrGlsi02 74535927 74537391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2451 1 249 C2H2 Transcription Factor Family AT2G41940 40.959 4.04e-44 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2451 02 74535927 74537391 Glsi11g1253 11 7885902 7886675 CCT
Glsi02g2451 02 74535927 74537391 Glsi02g2451 02 74535927 74537391 ECH