Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2448 ATGGCAACAAAACACGGTGCAAAATCAAAAAGACTATTATTAAGCAATTCAAAGGCCGCTAATTCGCCATCAACTTCCACTACATCATCTTCTAAACAATTTCTGGAAACATCCATTGATGGTCTGAGCTCGCCTGCATCTTCATCAGCTCGAAGTAAGCCACAGTATTTTTACTCAGAAAGTGTGCATTTAGATGCTGAAAGAGCTAAAGAAAATGTCACGGTGACAGTTCGATTTCGTCCACTGAATCCAAGGGAAATACGTCAAGGAGAGGAGGTTGCATGGTATGCTGATGGAGACACTGTTGTGCGAAACGAGTATAATCCAACCATAGCATATGCATACGATCGTGTATTTGGTCCTACAACCACAACACGTCATGTCTATGATGTTGCTGCTCAGCATACTGTTAATGGTGCTATGGAGGGAATCAATGGTACAATATTTGCATACGGGGTAACAAGCAGTGGCAAGACTCATACAATGCATGGTGATCAAAGGTCTCCTGGAATTATACCTCTTGCTGTCAAGGATGCATTTAGCATTATCCAAGAGACTCCAAATCGAGAGTTTCTCCTTCGAGTTTCATACTTGGAGATCTACAATGAGGTAGTTAATGACTTATTGAACCCAGCTGGACAGAACTTAAGAATCAGAGAGGACGCTCAGGGCACCTTTGTTGAGGGAATAAAGGAAGAGGTTGTTCTTTCTCCTGCTCACGCACTGTCCCTTATAGCAGCTGGAGAAGAGCATAGACATGTTGGATCCACAAACTTCAACCTACTCAGCAGCAGGAGCCATACAATATTTACCCTGACCATAGAAAGTAGTCCTTGTGGTGAAAATAATGAAGGAGAAGCTGTAACGCTGTCACAACTGAACCTCATCGATCTGGCAGGTTCTGAGAGCTCAAAGGCTGAAACAACTGGCATGAGAAGGAGAGAAGGATCTTACATCAATAAAAGTCTTTTAACTCTTGGCACGGTTATTTCAAAATTGACTGAAGGGAGAGCTAGTCACATACCTTATAGAGACTCCAAATTGACCAGGCTACTTCAGTCTTCACTCAGTGGTCATGGACGTGTATCTCTCATTTGCACAGTAACTCCTTCATCAAGTAGTGCAGAAGAGACACATAATACATTGAAGTTTGCCCACCGGGCAAAGCACATTGAAATACAAGCATCCCAAAACAAGATAATTGATGAGAAATCACTTATTAAGAAATACCAACATGAGATTCAATGCTTAAAAGAAGAGTTAGAACAATTGAAAAGGGGCATAGTCACAGTTCGGCCAAAAGATACTGGGGAAGATGACATTGTGCTTCTAAAACAAAAGCTAGAAGATGGTCAAGTCAAGTTGCAATCCAGATTGGAACAAGAAGAAGAAGCTAAAGCTGCTTTATTAAGCAGAATTCAACGGTTGACCAAGTTAATTTTGGTTTCCTCCAAACCATCACACACATCAAGAGTTCCTAACCGGCCTGGTCCACGAAGAAGACATTCGTTTGGGGAAGAAGAGCTGGCATACCTTCCATACAAAAGGCGGGATTTAATTTTAGAAGAGGAAAATGTTGATTTGTATGTTAATCTAGAGGGAAACGAGGAAACAGCTGATGATTCTCTTAAGGAGGAGAAAAAGACAAAGAAACATGGACTACTAAATTGGTTGAAATTACGGAAACGAGATAGTGGGTCCAGTGCCTTGACTGGCATTAGTGATAAATCCAGTGGAGCAAAATCAATTAGCTCACCTTCTACACCTCAAGCAGAAAGTGGTAATCATACAGAGTCCAGACTTTCCCATTCTCTACCTACAGAAAGCTCTCCATCTGCAGATCTTATATCAGAGGCTAGAGAGGGTAAAATAATTCATGAGGATAGTTTATTGGGACAAGAGACACCTTTGACAAGCATAAAATCAATTGATCAAATTGATCTTCTGAGGGAGCAGCAAAAGATTTTGTCTGGAGAGGTGGCACTTCATTCAAGTGCTCTGAAAAGGCTGTATGACGAAGCAGCAAAAAATCCTCAGAAGGATCAGATTCATGTGGAGATGAAAAGGTTGAAAGATGAAATTAAGGCTAAGAATGAACAAATAGATTTGCTGGAGAAGCAAATTGCTGATTCCTTCATTGGTTCAGATAAGATAGATCAATCAGGAGTATCACAGACTGTTGCTGACCTGATGGCACATTTAAATGAGAAATCCTTTGAACTTGAGGTCAAAGTTGCAGATAACCGAATAATTCAAGAACAACTCAACCAAAAGATCTGTGAATGCAAAAACCTTCAAGAAGTAGTTGCCTCCCTGAAACAGCAGCTTGCAGATGCATTAGAGTTGAAAAATTTTAGCGCTGTAGATCATTCACAACATTTCTCTGTAACCAAAGTACACTCTGGTGAACACCTGGATAAAGAAAATGTGATCATGGACAATTCCAATGAAGGGTTTCTTTTACAAACACAGATAGAAGAGCTGAAGCAGGTGGTGGCAGAATTAACAGAATCAAAAGAGCAGCTAGAACTTAGAAATCAGAAACTGGCAGAAGAGAGTTCATATGCCAAAGGGTTAGCCTCAGCTGCTGCTGTTGAGCTTAAAGCATTGTCAGAAGAAGTTGCCAAGCTCATGAACCATAACGAGAGACTTGCTGCTGAGCTAGCTGCATCCAAAAATTCCCCCACCCAACGTAGAAATAGTGCAGCAGTCCGAAATGGCCGAAGAGAAAGTCATGCTAGACGAAATGATCAAGGTGGGTCAAACTCAGACGTCAAGAGAGAACTGGCCCTGAGTAAAGAAAGGGAACAGTCATATGAAGCCACTCTTTTGGAGAAGGATCAGAAAGAGGCTGAGCTTCAAAGGAAGATTGAGGAGTCAAAGCAAAGAGAAGCATACCTGGAAAATGAACTTGCCAACATGTGGGTTCTTGTGGCGAAGCTAAAAAAGTCACAAGGAGCAGAAACTGATGTTTCTAGGTCCACTAGAGAGACTTTGCAAGTGGATGGTTTTGACATTTGA 3021 0.4138 MATKHGAKSKRLLLSNSKAANSPSTSTTSSSKQFLETSIDGLSSPASSSARSKPQYFYSESVHLDAERAKENVTVTVRFRPLNPREIRQGEEVAWYADGDTVVRNEYNPTIAYAYDRVFGPTTTTRHVYDVAAQHTVNGAMEGINGTIFAYGVTSSGKTHTMHGDQRSPGIIPLAVKDAFSIIQETPNREFLLRVSYLEIYNEVVNDLLNPAGQNLRIREDAQGTFVEGIKEEVVLSPAHALSLIAAGEEHRHVGSTNFNLLSSRSHTIFTLTIESSPCGENNEGEAVTLSQLNLIDLAGSESSKAETTGMRRREGSYINKSLLTLGTVISKLTEGRASHIPYRDSKLTRLLQSSLSGHGRVSLICTVTPSSSSAEETHNTLKFAHRAKHIEIQASQNKIIDEKSLIKKYQHEIQCLKEELEQLKRGIVTVRPKDTGEDDIVLLKQKLEDGQVKLQSRLEQEEEAKAALLSRIQRLTKLILVSSKPSHTSRVPNRPGPRRRHSFGEEELAYLPYKRRDLILEEENVDLYVNLEGNEETADDSLKEEKKTKKHGLLNWLKLRKRDSGSSALTGISDKSSGAKSISSPSTPQAESGNHTESRLSHSLPTESSPSADLISEAREGKIIHEDSLLGQETPLTSIKSIDQIDLLREQQKILSGEVALHSSALKRLYDEAAKNPQKDQIHVEMKRLKDEIKAKNEQIDLLEKQIADSFIGSDKIDQSGVSQTVADLMAHLNEKSFELEVKVADNRIIQEQLNQKICECKNLQEVVASLKQQLADALELKNFSAVDHSQHFSVTKVHSGEHLDKENVIMDNSNEGFLLQTQIEELKQVVAELTESKEQLELRNQKLAEESSYAKGLASAAAVELKALSEEVAKLMNHNERLAAELAASKNSPTQRRNSAAVRNGRRESHARRNDQGGSNSDVKRELALSKEREQSYEATLLEKDQKEAELQRKIEESKQREAYLENELANMWVLVAKLKKSQGAETDVSRSTRETLQVDGFDI 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2448 1006 FunFam Kinesin-like protein KIN-7G 64 422 - -
Glsi02g2448 1006 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi02g2448 1006 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi02g2448 1006 PRINTS Kinesin heavy chain signature 257 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi02g2448 1006 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi02g2448 1006 SMART kinesin_4 70 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi02g2448 1006 Pfam Kinesin motor domain 78 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi02g2448 1006 MobiDBLite consensus disorder prediction 903 928 - -
Glsi02g2448 1006 Coils Coil 445 479 - -
Glsi02g2448 1006 MobiDBLite consensus disorder prediction 567 613 - -
Glsi02g2448 1006 Coils Coil 755 782 - -
Glsi02g2448 1006 MobiDBLite consensus disorder prediction 1 51 - -
Glsi02g2448 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 426 IPR027417 -
Glsi02g2448 1006 Coils Coil 680 707 - -
Glsi02g2448 1006 Coils Coil 867 894 - -
Glsi02g2448 1006 Coils Coil 821 852 - -
Glsi02g2448 1006 PANTHER CENTROMERE PROTEIN E 69 986 IPR027640 GO:0003777|GO:0007018
Glsi02g2448 1006 Coils Coil 400 427 - -
Glsi02g2448 1006 MobiDBLite consensus disorder prediction 484 504 - -
Glsi02g2448 1006 Gene3D Kinesin motor domain 63 422 IPR036961 -
Glsi02g2448 1006 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi02g2448 1006 CDD KISc_CENP_E 72 391 - -
Glsi02g2448 1006 ProSiteProfiles Kinesin motor domain profile. 72 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi02g2448 1006 MobiDBLite consensus disorder prediction 887 928 - -
Glsi02g2448 1006 MobiDBLite consensus disorder prediction 14 51 - -
Glsi02g2448 1006 Coils Coil 939 970 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2448 Glsi-ChrGlsi02 74493891 74506326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2448 1 726 Miscellaneous Gene Families AT5G06670 70.588 0.0 941