Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2441 ATGTTGTGCTGCGGAGGTGCAGAGGAGGAAAGCAGTGGCCCACCTGCAAACCAATACACTGCACCACCTAGAGGTGGCAATGCATTCGGTGAAGGAGGGGGTGATAGAGGAGAGCCAAAAAGCAATATTGTCAAGAGTGGTGGTCCCCAGAAAGTTCTACCAATTGAGACCCCCGTAATGCCATTGGATGAGTTAAATAGGCTAACAGACAACTTTGGCTCAAAGGCTTTAATTGGAGAAGGTTCCTATGGACGGGTTTTCTACGCAAAGTTAAGTGATGGTGCCGATGCAGCAATCAAGAAGCTGGATACCAGTTCTTCAGAGCCGGACGATGATTTTGCAGCTCAGTTATCTATCGTTTCAAGACTGAAGCAGGATAATTTTGTGGAGTTGATTGGATACTGTCTGGAGGCAAACAATAGAATTTTGGTTTACCAATTTGCAAATCTGGGTTCTTTGCACGACGTATTACATGGGAGGAAAGGTGTACAAGGGGCTGAACCGGGTCCAGTTCTAAACTGGAACCAGAGAGCAAAAATTGCATTTGGAGCAGCAAAAGGGCTTGAGTTTCTTCATGAAAAGGTTCAGCCTTCTATAGTTCATCGTGATATTAGATCCAGCAATGTCTTGCTGTTCCGTGACTATGAAGCCAAGATTGCCGATTTCAGCTTGACAAGTCAGTGTTCTGACACAGCAGCTCGACTACATTCAACAAGAGTCTTGGGAACTTTTGGCTATCATGCTCCAGAGTACGCAATGACCGGGCAGATAACCCAGAAAAGTGATGTTTACAGTTTCGGAGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAACCAGTAGACCACACAATGCCCAAGGGGCAACAAAGTCTTGTAACTTGGGCCACTCCAAGGCTGAGTGAGGACAAAGTGAAACAATGTGTGGATCCCAAGCTAAACAGTGAGTACCCGCCAAAGGCAATTGCCAAGTTGGCAGCGGTTGCAGCACTTTGTGTTCAGTATGAGGCTGACTTCAGGCCAAACATGACCATTGTTGTGAAAGCTCTGCAGCCACTTCTCACTTCAAAACCGGCTGGCCCAGACCCTGCTGCTTGA 1095 0.4667 MLCCGGAEEESSGPPANQYTAPPRGGNAFGEGGGDRGEPKSNIVKSGGPQKVLPIETPVMPLDELNRLTDNFGSKALIGEGSYGRVFYAKLSDGADAAIKKLDTSSSEPDDDFAAQLSIVSRLKQDNFVELIGYCLEANNRILVYQFANLGSLHDVLHGRKGVQGAEPGPVLNWNQRAKIAFGAAKGLEFLHEKVQPSIVHRDIRSSNVLLFRDYEAKIADFSLTSQCSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNSEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLTSKPAGPDPAA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2441 364 FunFam probable protein kinase At2g41970 45 147 - -
Glsi02g2441 364 Gene3D Phosphorylase Kinase; domain 1 42 147 - -
Glsi02g2441 364 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Glsi02g2441 364 ProSiteProfiles Protein kinase domain profile. 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2441 364 Gene3D Transferase(Phosphotransferase) domain 1 149 358 - -
Glsi02g2441 364 Pfam Protein tyrosine and serine/threonine kinase 77 349 IPR001245 GO:0004672|GO:0006468
Glsi02g2441 364 SMART tyrkin_6 72 349 IPR020635 GO:0004713|GO:0006468
Glsi02g2441 364 SUPERFAMILY Protein kinase-like (PK-like) 51 349 IPR011009 -
Glsi02g2441 364 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 357 - -
Glsi02g2441 364 FunFam PTI1-like tyrosine-protein kinase 3 149 358 - -
Glsi02g2441 364 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Glsi02g2441 364 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2441 Glsi-ChrGlsi02 74440891 74442907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2441 59 356 Receptor kinase-like Gene Family AT3G58690 45.151 2.60e-87 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Glsi02g2441 PK_Tyr_Ser-Thr 1.2e-44 CL0016