Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2410 ATGAACGAGAACGAGATTGATTGGTCAGGGCGGGTTCAAATTCAACAGAGCCATGGGCTAAATGGTTCTTGTCAGTATTTTGATATCAATCAGACCTGGAAAATGGGAACTTGCAGTGAGGCAGTTGCCATGGCCGGAGGAGAAGAACAGCCACCATCCATAGGCCCTGCCACTGCCAAATCATCTAGCACCATCTTGAGCCGTTTTGATTCACCAGCTTCTGCTTTTTATGCAACAGAACGCTGCATGAGGTTTCCTCAATATGATTCCCAAGTTGGTAATCCCTCTTTGAGCTCTCAATTTTCTAAGGTTAACGATTTCGAATTCCCTTTGTATCAATCTGACCCCAACATTGAATTGTCAAACACCTTGCAAGCAATGGTGAAATCTCAATTGAATAGTAATCAATACTGTGGATCCCCTGAAAAATCCAACGAAATTTGTTGTGGGAATTTGCCAAGCAGCAAGTTTCTTCCTATTGAACCACACAAATTGTTCATTAATGATGCTCCCTCCGTTAAAAGGAACGTATCAAATCCTTATAAGGGAAATCAGAACCGTACAGTTGGGTGTGGCTCATATAATTTACATTTCACTCAGTTGAGTTTCTCTTCGCAGCAAGAGAAGCTGTCTCCAATACTCTCAGCAGGAAGTGTGTCAACCAGTTCTGGAAACCCTGGTTCTAATGGGACGGTAGTCTCAAGTAAAACGCGTATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTAGAGTGTGTGAATCGCCTCGGAGGTGCTGAGAGGGCAACACCAAAGGCTATATTAAGGCTGATGGAATCAGATGGATTGACCATCTTCCATGTAAAGAGTCATTTGCAGAAATACAGAATTGCAAAATACATGCCAGACTCTGCTCAAGGGAAGTCTGACAAAAGAACCCATATAGAAAATGTGCACCATCTTGACCCCAAAACTGGATTGCAAATTAGAGAGGCACTTCAGCTGCAGTTAGATGTTCAAAGGCGTCTTCATGAGCAGCTAGAGATTCAGAGGAAATTACAGTTGAGAATTGAGGAACAGGGGAGGCAGTTGAAGATGATGTTTGATCAGCAGCAGAAGACAAGTAATAGCCCCATGAATACTCAGAATTTGACGAGTACCGCCAACGATGATACATCAAATAGTCTTAAAGGTGTTGAGGTATCAATTTCTGAAGGGTCTGGGAATTCTTTCTTCCCCTCCAATATAAGGGCTGGTTTTAACTTGGCTTGGGACTTTGGGTGGAAAGTAACTCTTAACGCTAATGCTCTTGTAAAGATGGGTTCTGTACAAGTTGTCTACACTCACCGTTCTCGAGCGTGCGTTGTTTCAAGTGACGACAATGAAGCGAGGAGGCAGACCCAAGATCATGCTGAGTTAAAATAG 1404 0.4302 MNENEIDWSGRVQIQQSHGLNGSCQYFDINQTWKMGTCSEAVAMAGGEEQPPSIGPATAKSSSTILSRFDSPASAFYATERCMRFPQYDSQVGNPSLSSQFSKVNDFEFPLYQSDPNIELSNTLQAMVKSQLNSNQYCGSPEKSNEICCGNLPSSKFLPIEPHKLFINDAPSVKRNVSNPYKGNQNRTVGCGSYNLHFTQLSFSSQQEKLSPILSAGSVSTSSGNPGSNGTVVSSKTRIRWTQDLHEKFVECVNRLGGAERATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPDSAQGKSDKRTHIENVHHLDPKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGRQLKMMFDQQQKTSNSPMNTQNLTSTANDDTSNSLKGVEVSISEGSGNSFFPSNIRAGFNLAWDFGWKVTLNANALVKMGSVQVVYTHRSRACVVSSDDNEARRQTQDHAELK 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2410 467 MobiDBLite consensus disorder prediction 363 388 - -
Glsi02g2410 467 SUPERFAMILY Homeodomain-like 234 290 IPR009057 -
Glsi02g2410 467 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 218 403 IPR044848 GO:0003700
Glsi02g2410 467 MobiDBLite consensus disorder prediction 216 235 - -
Glsi02g2410 467 FunFam Myb family transcription factor 235 293 - -
Glsi02g2410 467 NCBIfam myb-like DNA-binding domain, SHAQKYF class 236 291 IPR006447 GO:0003677
Glsi02g2410 467 Pfam MYB-CC type transfactor, LHEQLE motif 320 367 IPR025756 -
Glsi02g2410 467 Coils Coil 323 343 - -
Glsi02g2410 467 Gene3D - 235 294 - -
Glsi02g2410 467 Pfam Myb-like DNA-binding domain 240 289 IPR001005 -
Glsi02g2410 467 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 235 293 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2410 Glsi-ChrGlsi02 74249895 74255068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2410 219 364 G2-like Transcription Factor Family AT4G28610 59.459 2.33e-51 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi02g2410 Myb_DNA-binding 1.8e-06 CL0123