Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2406 ATGGACTCCAGAGTCTACATCTCATTCACTGAAATGGGTTCATCCTCTGTGACCAAAGCACCACTTATCGATTCTTCTTCCCCCAACTCCTCCGCCGAGCTGCTTAATGGTTTGAAGTTCGGCCAGAAAATATATTTTGAGGATGTGGGTGTCGGAGTTCCGGTCAAATCCGGTGCCAGTGGGGGGTCCTCCTCCTCTGGGGCGACCCCGACAAAGAAGGGGAGGGGTGGCGCTGTGCAGGGAGCTCAGCCTCCTAGGTGTCAGGTCGAAGGCTGTAAAGTAGATCTGACTGATGCTAAGGCTTACTATTCCAGGCATAAAGTCTGCGGCATGCACTCTAAATCGCCCAGGGTCATTGTCGCTGGTCTGGAGCAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCTGCTTCCTGAATTTGATAAAGAAAAACGAAGTTGCCGCAGGCGACTTGCAGGCCATAATGAACGTCGGCGAAAGCCCCCATCCAGCTCCTTGTTGAACTCTCGCTTTGGCCGACTCTCTTCCCCTATCTTTGATAACAGTGGCAGAGTTGGTGGCTTTCTGATGGAATTTTCTTCATACCCAAAGCTAACAATGAGGAATGAGATGTCAACCCCGAGATCATCTGAGCAAGTTGCAGGATATCGAACCTCAACACCTCCCTGGCAGGGCAACTCGGAGACTCCATCTGAACTTTTCCTGCGAGGTTCAGGGAGTGGGATAAGCTACCCTCATCCCAGAAATCCTCCAGGGGAAAACTTCACGAGAATAACAGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAATCAAACATGGGGCCCCAGAAATAGAGCACCAAATCTTGGGGTGAACAACTTGTATTCCAGTGGAACACCCATGACACAATTTGCTGCATCATCTCATGGCGCTGCCATCCATCAACTTTCAAATCCCTCGTGGTGTTTCAAAGGCAATGAAGCTGGTAATTGTTCACACGAGCAGCCTCTTGACACTCAACTTCCTGGTGAGCTTCTTGTTCCACAACCAGACCGGAGGCAGTATATGGATCTAGAGCAGTACAGGGCCTGCGAGTCTTCTCATCTTATGCACTGGTCACTTTAA 1104 0.4991 MDSRVYISFTEMGSSSVTKAPLIDSSSPNSSAELLNGLKFGQKIYFEDVGVGVPVKSGASGGSSSSGATPTKKGRGGAVQGAQPPRCQVEGCKVDLTDAKAYYSRHKVCGMHSKSPRVIVAGLEQRFCQQCSRFHLLPEFDKEKRSCRRRLAGHNERRRKPPSSSLLNSRFGRLSSPIFDNSGRVGGFLMEFSSYPKLTMRNEMSTPRSSEQVAGYRTSTPPWQGNSETPSELFLRGSGSGISYPHPRNPPGENFTRITDSSCALSLLSNQTWGPRNRAPNLGVNNLYSSGTPMTQFAASSHGAAIHQLSNPSWCFKGNEAGNCSHEQPLDTQLPGELLVPQPDRRQYMDLEQYRACESSHLMHWSL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2406 367 MobiDBLite consensus disorder prediction 203 230 - -
Glsi02g2406 367 FunFam Squamosa promoter-binding-like protein 14 78 148 - -
Glsi02g2406 367 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 24 319 IPR044817 GO:0003677
Glsi02g2406 367 Gene3D - 77 148 IPR036893 GO:0003677|GO:0005634
Glsi02g2406 367 Pfam SBP domain 87 160 IPR004333 GO:0003677
Glsi02g2406 367 ProSiteProfiles Zinc finger SBP-type profile. 84 161 IPR004333 GO:0003677
Glsi02g2406 367 MobiDBLite consensus disorder prediction 57 85 - -
Glsi02g2406 367 SUPERFAMILY SBT domain 85 166 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2406 Glsi-ChrGlsi02 74231743 74234217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2406 38 367 SBP-box Gene Family AT2G42200 44.384 6.35e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Glsi02g2406 SBP 7.8e-32 No_clan