Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2404 ATGGTTTGCAAGAACCATTATGTGCATCTCATTATAGTTGTCTTCTCGGCAATTTTGACTTCTCGGGGTTTAGCATTTACTAATCCGGCTGACGCAGTCACAGCTCTCCAAGACCTATACAAGACCTTGAACTATCCACCGGTGCTCAAAGGATGGAATGGTGGAGATCCTTGTCAGGAATCTTGGACAGGAGTAGCATGTTCTGGGTCATCAGTCATTCACCTCAAAATTCAAGGATTAAATCTCACCGGGCATCTTGGAGGCCAGCTCTATAATCTACAGCACTTAAAGAAACTTGATATCAGCTCCAATAATATAGTGGGTGACCTACCATTTGGCTTACCCCCCAATGTCACACATATAAATATGGCTTGCAACTATTTGAGCCAAAATATTCCCCACTCATTACCTATCATGAAAAAACTACGACATCTGAATCTAAGCCACAATTTCTTATCTGGACCCATTGGCAATGTTTTCACTGGCTTAGCTAATCTCAAAGAGATGGACCTTTCATATAACAATTTCACGGGAGATCTACCAAGTTCATTTGGTTCCTTGACAAACCTTACTAGATTGTTCCTGCAAAATAACGGCTTTACTGGATCGGTCACGTATCTGGCTGAACTTCCTCTTATAGATTTTGTACCAGTTGAGCATAATATTAGTCGCCCACCCACGACTCAGGCAAATGCCATCGAGAACTATTCCCCTCCCAAAGTAAGAGGGCACAAGAAGAAACGTATGGGTCCTGGAGGAATAGCTTTTATGGTTGGTGGAGGAACACTATTGGCTACAGGTGTGGCACTCTTCATTGCAATCCGTTTGAATCGATTGAATGAACAGAGGCTGAAGAGATTAGGAAGCAGCCATAGCTCATTACAATCTCATCCAACCAGTGCAACCATAGAAGTCTCTTCTACCGCACTAGAAGGGAGCCCACAAATCCCACCATTCAATTCTTCATCCCTTATGGGTCCAAGGCGATTACCTCCCCTGCACCATAACAGAACAGAGGAAACATCAAGAAGAAGTTTTTCCAAAAGATGCAGATTTTCCGGAAGGGCAAAAGTTTACACAGTGGGGGAGCTTCAGTTAGCTACAAACAGCTTCGGTGAAGACAACCTTTTGGGAGAGGGATCTCTTGGTCCTGTTTACAGAGCCGAGTTTCCCGATGGCCAAGGGCAGCATCTAATTGTTTACGATTATGTTAGAAATTTAAGTCTGCACGATGCTCTTCACAGCGAAGCATACAAGCCTCTATCGTGGGCCCTCCGTCTCCGAATTGCCCTTGGTGTTGCCCAGGCTCTGGATTATTTGCACTCTACGTTCTCCCCTCCTGTCGCCCACAGCAACTTGAAGGCTGCCAATATCCTACTTGACGAAAATCTGATGCCTCGCGTCTGTGACTGTGGCCTAGCTATTTTGACACCGCTGACAAGCAACAAAGTCAAAATTACAGCTTCTGAAATTGCTAGTGTGGACGCAGGCTACATTGCACCTGACCATGGCCAACCAGGAATTGGCAACATAAAGAGTGACGTCTTTGCCTTTGGGGTGTTGCTTCTGGAATTATTAACAGGAAGGAAACCTTTCGATATGTATCTGTTTCTCTTTCAACCCAGTTCCAGGCCAAGGGAGGAACAATATCTGGCAAAATGGGCTTCATCAAGGCTTCATGATAGCGACAGTTTAGAACAGATGGTGGATCCGGGAATTAAAAGGACGGTTTCATCCAAGGCTCTTTCCCGTTACGCTGATATCGTCTCCCTCTGCATACAGCCTGTGAAGGAATTCCGACCCCCAATGTCTGAGGTGGTGGATTCTCTTATATCTTTTTCACGAAAGTTCAGCATGGGAAAGAGCGGTGCTGTAGCAGATGGTAGTGACTTCGATACACTAGAGAAGTCTTTCCGTTCAACCAACACTCGCTTTCTGGGTTCACCTGCATTGAGCTATGTATCCAAAGTTGCTGATCCTACATTTTCTAAAAGAAATCTTAGAATGGCGGGGGTTGGTTTCTACTCCTGTCTTTCCTCCTCCAGCAACTTACGGACATCTTGGTTGGTATTAAAAACTCACAATGCAAGGACCATGCCAGGGAGGAGAAGTTTGACACTAAAAGCCGAAGTGACGTATGTAAATGCTGAACAAGCAAAAGAACTCATAGCAGTCGAGGGATATACAGTTCTGGATGTGAGGGACAAAACTCAGTTCGACCGTGCTCACATAAAATCATGCTATCATGTGCCTCTTTTTATTGAAAATCAAGACAACGATCTCGGTACAATTATAAAAAGGACTCTGCACAATAATTTTTCTGGGTTGTTCTTTGGGTTGCCATTCACTAAATTAAACCCTGATTTTTTGCAATCTGTTAAGAGCCAGCTTCCGCCTGAAAAAAAGCTCTTGGTTGTATGTCAGGAAGGACTGAGATCTGCTGCTGCAGCAAATAGATTAGAGCAAGCCGGTTTCTCAAATATAGCATGTATCACATCAGGCCTTCAAACTGTTAAACCAGGAACATTTGATTCTGTTGGTTCTACGGAGTTGCAGAATGCTGGCAAAGCTGGTTTGGTGACAATCCAAGGACAGATCTCGGCTGTATTGGGAACAGTTCTTATATGCGCATTTTTATTCATTACCTTCTTCCCAGATCAAGCAGAGAAGATATTCCAATTAGCCCCAGCAGGCTAG 2697 0.4427 MVCKNHYVHLIIVVFSAILTSRGLAFTNPADAVTALQDLYKTLNYPPVLKGWNGGDPCQESWTGVACSGSSVIHLKIQGLNLTGHLGGQLYNLQHLKKLDISSNNIVGDLPFGLPPNVTHINMACNYLSQNIPHSLPIMKKLRHLNLSHNFLSGPIGNVFTGLANLKEMDLSYNNFTGDLPSSFGSLTNLTRLFLQNNGFTGSVTYLAELPLIDFVPVEHNISRPPTTQANAIENYSPPKVRGHKKKRMGPGGIAFMVGGGTLLATGVALFIAIRLNRLNEQRLKRLGSSHSSLQSHPTSATIEVSSTALEGSPQIPPFNSSSLMGPRRLPPLHHNRTEETSRRSFSKRCRFSGRAKVYTVGELQLATNSFGEDNLLGEGSLGPVYRAEFPDGQGQHLIVYDYVRNLSLHDALHSEAYKPLSWALRLRIALGVAQALDYLHSTFSPPVAHSNLKAANILLDENLMPRVCDCGLAILTPLTSNKVKITASEIASVDAGYIAPDHGQPGIGNIKSDVFAFGVLLLELLTGRKPFDMYLFLFQPSSRPREEQYLAKWASSRLHDSDSLEQMVDPGIKRTVSSKALSRYADIVSLCIQPVKEFRPPMSEVVDSLISFSRKFSMGKSGAVADGSDFDTLEKSFRSTNTRFLGSPALSYVSKVADPTFSKRNLRMAGVGFYSCLSSSSNLRTSWLVLKTHNARTMPGRRSLTLKAEVTYVNAEQAKELIAVEGYTVLDVRDKTQFDRAHIKSCYHVPLFIENQDNDLGTIIKRTLHNNFSGLFFGLPFTKLNPDFLQSVKSQLPPEKKLLVVCQEGLRSAAAANRLEQAGFSNIACITSGLQTVKPGTFDSVGSTELQNAGKAGLVTIQGQISAVLGTVLICAFLFITFFPDQAEKIFQLAPAG 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2404 898 MobiDBLite consensus disorder prediction 289 322 - -
Glsi02g2404 898 Gene3D Phosphorylase Kinase; domain 1 343 407 - -
Glsi02g2404 898 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 701 843 - -
Glsi02g2404 898 Pfam Leucine rich repeat 159 199 IPR001611 GO:0005515
Glsi02g2404 898 CDD RHOD 718 839 - -
Glsi02g2404 898 SMART rhod_4 714 844 IPR001763 -
Glsi02g2404 898 Pfam Rhodanese-like domain 716 836 IPR001763 -
Glsi02g2404 898 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 669 897 IPR044615 -
Glsi02g2404 898 MobiDBLite consensus disorder prediction 289 346 - -
Glsi02g2404 898 Gene3D - 702 842 IPR036873 -
Glsi02g2404 898 Pfam Protein tyrosine and serine/threonine kinase 394 610 IPR001245 GO:0004672|GO:0006468
Glsi02g2404 898 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 228 - -
Glsi02g2404 898 ProSiteProfiles Rhodanese domain profile. 724 847 IPR001763 -
Glsi02g2404 898 MobiDBLite consensus disorder prediction 332 346 - -
Glsi02g2404 898 SUPERFAMILY Protein kinase-like (PK-like) 345 610 IPR011009 -
Glsi02g2404 898 FunFam Leucine-rich repeat receptor-like protein kinase 404 621 - -
Glsi02g2404 898 Gene3D Ribonuclease Inhibitor 30 330 IPR032675 -
Glsi02g2404 898 ProSiteProfiles Protein kinase domain profile. 319 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2404 898 SUPERFAMILY L domain-like 33 204 - -
Glsi02g2404 898 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Glsi02g2404 898 Gene3D Transferase(Phosphotransferase) domain 1 408 626 - -
Glsi02g2404 898 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 708 836 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2404 Glsi-ChrGlsi02 74218105 74226653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2404 1 655 Strubbelig Receptor Gene Family AT5G06820 47.989 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Glsi02g2404 PK_Tyr_Ser-Thr 2.7e-22 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2404 02 74218105 74226653 Glsi02g2404 02 74218105 74226653 ECH